Evidence map›Paper›PMID 36112344›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2022

Computational Insights into the Catalytic Mechanism of Is-PETase: An Enzyme Capable of Degrading Poly(ethylene) Terephthalate.

Eugene Shrimpton-Phoenix, John B O Mitchell, Michael Bühl

Open access · hybridAbstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
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  8. Trends inComputational and structural biotechnology journal · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Eugene Shrimpton-PhoenixEaStChem School of Chemistry, University of St Andrews, KY16 9ST, St Andrews, UK.
John B O MitchellEaStChem School of Chemistry, University of St Andrews, KY16 9ST, St Andrews, UK.
Michael BühlEaStChem School of Chemistry, University of St Andrews, KY16 9ST, St Andrews, UK.ORCID http://orcid.org/0000-0002-1095-7143
University of St Andrews · GB

Funding

Biotechnology and Biological Sciences Research Council EastBio studentship
6 · The paper itself

Abstract

Is-PETase has become an enzyme of significant interest due to its ability to catalyse the degradation of polyethylene terephthalate (PET) at mesophilic temperatures. We performed hybrid quantum mechanics and molecular mechanics (QM/MM) at the DSD-PBEP86-D3/ma-def2-TZVP/CHARMM27//rev-PBE-D3/dev2-SVP/CHARMM level to calculate the energy profile for the degradation of a suitable PET model by this enzyme. Very low overall barriers are computed for serine protease-type hydrolysis steps (as low as 34.1 kJ mol

Indexed as

Phthalic AcidsPolyethylene TerephthalatesCatalysisEthylenesHydrolasesEthylenesHydrolasesPhthalic AcidsPolyethylene Terephthalatesterephthalic acidcatalysisenzymegreen chemistryplasticsQM/MM

Identifiers

PMID36112344
PMCPMC10091965
OpenAlexW4296039015

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.