Evidence map›Paper›PMID 36110569›Full record

ArticleComputational and mathematical methods in medicine2022

Presepsin Predicts Severity and Secondary Bacterial Infection in COVID-19 by Bioinformatics Analysis.

Yufei Chang, Linan Liu, Hui Wang, Jinghe Liu, Yuwei Liu, Chunjing Du, Mingxi Hua, Xinzhe Liu, Jingyuan Liu, Ang Li

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yufei ChangDepartment of Emergency, Beijing Ditan Hospital Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0001-6137-0329
Linan LiuDepartment of Emergency, Beijing Ditan Hospital Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0003-1309-2736
Hui WangDepartment of Emergency, Beijing Ditan Hospital Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-7656-2611
Jinghe LiuDepartment of Emergency, Beijing Ditan Hospital Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-3017-4816
Yuwei LiuDepartment of Emergency, Beijing Ditan Hospital Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-5916-7126
Chunjing DuDepartment of Critical Care Medicine Beijing Ditan Hospital, Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-9594-5765
Mingxi HuaBiomedical Innovation Center, Beijing Shijitan Hospital, Capital Medical University Beijing Key Laboratory of Emerging Infectious Diseases, China.ORCID https://orcid.org/0000-0003-2525-6822
Xinzhe LiuInstitute of Infectious Diseases, Beijing Ditan Hospital, Capital Medical University, China.ORCID https://orcid.org/0000-0002-8453-723X
Jingyuan LiuDepartment of Critical Care Medicine Beijing Ditan Hospital, Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-0592-9789
Ang LiDepartment of Critical Care Medicine Beijing Ditan Hospital, Capital Medical University, Beijing, China.ORCID https://orcid.org/0000-0002-1478-3072
Capital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Novel coronavirus pneumonia (COVID-19) is an acute respiratory disease caused by the novel coronavirus SARS-CoV-2. Severe and critical illness, especially secondary bacterial infection (SBI) cases, accounts for the vast majority of COVID-19-related deaths. However, the relevant biological indicators of COVID-19 and SBI are still unclear, which significantly limits the timely diagnosis and treatment. Methods: The differentially expressed genes (DEGs) between severe COVID-19 patients with SBI and without SBI were screened through the analysis of GSE168017 and GSE168018 datasets. By performing Gene Ontology (GO) enrichment analysis for significant DEGs, significant biological processes, cellular components, and molecular functions were selected. To understand the high-level functions and utilities of the biological system, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis was performed. By analyzing protein-protein interaction (PPI) and key subnetworks, the core DEGs were found. Results: 85 DEGs were upregulated, and 436 DEGs were downregulated. The CD14 expression was significantly increased in the SBI group of severe COVID-19 patients ( Conclusion: Presepsin predicts severity and SBI in COVID-19 and may be associated with prognosis in COVID-19.

Indexed as

Bacterial InfectionsCOVID-19Computational BiologyDatabases, GeneticGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansLipopolysaccharide ReceptorsPeptide FragmentsSARS-CoV-2Signal TransductionLipopolysaccharide ReceptorsPeptide Fragmentspresepsin protein, human

Identifiers

PMID36110569
PMCPMC9470340
OpenAlexW4296032561

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.