Evidence map›Paper›PMID 36109290›Full record

ArticleHuman immunology2022

HLA-B evolutionary divergence is associated with outcomes after SARS-CoV-2 infection.

Patricia V Hernandez, Brian Duffy, Karl Hock, Christopher Farnsworth, Emily Schindler, Chang Liu

Abstract read
In one paragraph

Article in Human immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  4. Frontiers in medicine · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Patricia V HernandezDepartment of Pathology and Immunology, Washington University in St. Louis School of Medicine, United States.
Brian DuffyBarnes-Jewish Hospital, HLA Laboratory, United States.
Karl HockDepartment of Pathology and Immunology, Washington University in St. Louis School of Medicine, United States.
Christopher FarnsworthDepartment of Pathology and Immunology, Washington University in St. Louis School of Medicine, United States.
Emily SchindlerMercy Hospital in St. Louis, United States.
Chang LiuDepartment of Pathology and Immunology, Washington University in St. Louis School of Medicine, United States. Electronic address: cliu32@wustl.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined the correlation between class I HLA evolutionary divergence (HED), a surrogate for the capacity to present different peptides, and the outcomes of 234 adult inpatients with confirmed SARS-CoV-2 infection. Genomic DNA was extracted from peripheral blood and genotyped by next-generation sequencing (NGS). HED scores for HLA class I (HLA-A, -B, and -C) genotypes were calculated using Grantham's distance. Higher HED scores for HLA-B, but not HLA-A or -C, are significantly associated with a decreased probability of poor outcomes including ICU admission, mechanical ventilation, and death (OR = 0.93; P = 0.04) in the univariate analysis. In the multivariate analysis, increased HLA-B HED score, younger age, and no comorbidity were independently associated with favorable outcomes (P = 0.02, P = 0.01, and P = 0.05, respectively). This finding is consistent with the notion that broader peptide repertoires presented by class I HLA may be beneficial in infection control.

Indexed as

COVID-19AdultGenotypeHLA-B AntigensHospitalizationHumansSARS-CoV-2HLA-B AntigensCOVID-19Grantham’s distanceHLA-BHLA class IHLA Evolutionary divergence

Identifiers

PMID36109290
PMCPMC9464580

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.