Evidence map›Paper›PMID 36109148›Full record

ArticleGenome research2022

The western redcedar genome reveals low genetic diversity in a self-compatible conifer.

Tal J Shalev, Omnia Gamal El-Dien, Macaire M S Yuen, Shu Shengqiang, Shaun D Jackman, René L Warren, Lauren Coombe, Lise van der Merwe, Ada Stewart, Lori B Boston and 17 more

Abstract read
In one paragraph

Article in Genome research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
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  7. Review
  8. NGATHA carpel development genes evolved in the common ancestor of seed plants.The Plant journal : for cell and molecular biology · 2025
    Article
  9. Article
  10. Article
  11. Population structure limits the use of genomic data for predicting phenotypes and managing genetic resources in forest trees.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Article
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  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Tal J ShalevMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0001-5809-7536
Omnia Gamal El-DienMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0002-9112-8522
Macaire M S YuenMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0003-3179-6956
Shu ShengqiangDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
Shaun D JackmanCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0002-9275-5966
René L WarrenCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0002-9890-2293
Lauren CoombeCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0002-7518-2326
Lise van der MerweBritish Columbia Ministry of Forests, Victoria, British Columbia V8W 9E2, Canada.
Ada StewartHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Lori B BostonHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0000-0003-1872-2127
Christopher PlottHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0000-0002-0109-5174
Jerry JenkinsHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0000-0002-7943-3997
Guifen HeDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.ORCID 0000-0003-0433-2822
Juying YanDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.ORCID 0000-0003-0079-4800
Mi YanDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
Jie GuoDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
Jesse W BreinholtRapid Genomics, Gainesville, Florida 32601, USA.ORCID 0000-0002-3867-2430
Leandro G NevesRapid Genomics, Gainesville, Florida 32601, USA.ORCID 0000-0002-8365-6827
Jane GrimwoodHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0000-0002-8356-8325
Loren H RiesebergDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0002-2712-2417
Jeremy SchmutzDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.ORCID 0000-0001-8062-9172
Inanc BirolCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0003-0950-7839
Matias KirstSchool of Forest, Fisheries and Geomatic Sciences, University of Florida, Gainesville, Florida 32603, USA.ORCID 0000-0002-8186-3945
Alvin D YanchukBritish Columbia Ministry of Forests, Victoria, British Columbia V8W 9E2, Canada.
Carol RitlandMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0003-1765-6228
John H RussellBritish Columbia Ministry of Forests, Victoria, British Columbia V8W 9E2, Canada.
Joerg BohlmannMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.ORCID 0000-0002-3637-7956

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We assembled the 9.8-Gbp genome of western redcedar (WRC;

Indexed as

TracheophytaAllelesGenetic VariationHeterozygotePolymorphism, GeneticSelection, GeneticSelf-Fertilization

Identifiers

PMID36109148
PMCPMC9712635

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.