Evidence map›Paper›PMID 36107347›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Quantification of Redox-Sensitive GFP Cysteine Redox State via Gel-Based Read-Out.

Finja Bohle, Andreas J Meyer, Stefanie J Mueller-Schuessele

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Finja BohleInstitute of Crop Science and Resource Conservation (INRES), Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.
Andreas J MeyerInstitute of Crop Science and Resource Conservation (INRES), Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.
Stefanie J Mueller-SchuesseleMolecular Botany, Department of Biology, TU Kaiserslautern, Kaiserslautern, Germany. mueschue@rhrk.uni-kl.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, fluorescent protein biosensors are widely used in research. In vivo, they can be applied to dynamically monitor several physiological parameters in various subcellular compartments. Redox-sensitive green fluorescent protein 2 (roGFP2) senses the glutathione redox potential via a disulfide bridge formed between neighboring beta-strands of its beta-barrel structure. As changes in redox state affect both excitation maxima of roGFP2 oppositely, sensor responses are ratiometric. The reaction mechanism of roGFP2 is well characterized and involves an intermediate S-glutathionylation step. Thus, roGFP2 is also used in enzymatic in vitro assays, e.g., assessing glutaredoxin kinetics. In addition to the fluorescent read-out, the roGFP2 redox state can also be determined by differential migration on a non-reducing SDS-PAGE. This read-out mode may be beneficial in some applications, e.g., if mass-spectrometric analysis of posttranslational cysteine modifications is desired. Here, we describe a protocol for gel-based fluorescent read-out of the roGFP2 redox state, as well as modification of free cysteines by maleimide-based reagents.

Indexed as

CysteineGlutaredoxinsDisulfidesGlutathioneGreen Fluorescent ProteinsMaleimidesOxidation-ReductionCysteineDisulfidesGlutaredoxinsGlutathioneGreen Fluorescent ProteinsMaleimidesCysteine modificationFluorescent biosensorMPEG-MalRedox-sensitive GFPS-glutathionylation

Identifiers

PMID36107347

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.