Evidence map›Paper›PMID 36106943›Full record

ArticleBiochemistry2022

Computationally Guided Redesign of a Heme-free Cytochrome with Native-like Structure and Stability.

Alexander M Hoffnagle, Vanessa H Eng, Ulrich Markel, F Akif Tezcan

Abstract read
In one paragraph

Article in Biochemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Structure of the human respiratory complex II.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alexander M HoffnagleDepartment of Chemistry and Biochemistry, University of California, La Jolla, San Diego, California 92093, United States.ORCID 0000-0002-4840-312X
Vanessa H EngDepartment of Chemistry and Biochemistry, University of California, La Jolla, San Diego, California 92093, United States.ORCID 0000-0002-4832-6654
Ulrich MarkelDepartment of Chemistry and Biochemistry, University of California, La Jolla, San Diego, California 92093, United States.ORCID 0000-0002-5655-5342
F Akif TezcanDepartment of Chemistry and Biochemistry, University of California, La Jolla, San Diego, California 92093, United States.ORCID 0000-0002-4733-6500

Funding

MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008326 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 1989 to 2020
$7.5M
Design and Evolution of Metal-Based Functions in Supramolecular Protein ScaffoldsR01GM138884 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TEZCAN, F. AKIF · 2020 to 2025
$2.0M
NIGMS NIH HHS R01 GM138884NIGMS NIH HHS T32 GM008326
6 · The paper itself

Abstract

Metals can play key roles in stabilizing protein structures, but ensuring their proper incorporation is a challenge when a metalloprotein is overexpressed in a non-native cellular environment. Here, we have used computational protein design tools to redesign cytochrome

Indexed as

HemeproteinsMetalloproteinsCytochrome b GroupCytochromes bHemeLigandsCytochrome b GroupCytochromes bHemeHemeproteinsLigandsMetalloproteins

Identifiers

PMID36106943
PMCPMC9949987

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.