Evidence map›Paper›PMID 36105058›Full record

ArticleAmerican journal of translational research2022

Identification of differentially expressed autophagy genes associated with osteogenic differentiation in human bone marrow mesenchymal stem cells.

Yibo Xu, Zhimeng Wang, Yakang Wang, Qiang Huang, Cheng Ren, Liang Sun, Qian Wang, Ming Li, Hongliang Liu, Zhong Li and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Yibo XuDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Zhimeng WangDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Yakang WangDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Qiang HuangDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Cheng RenDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Liang SunDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Qian WangDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Ming LiDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Hongliang LiuDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Zhong LiDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Kun ZhangDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Teng MaDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Yao LuDepartment of Orthopaedic Surgery, Honghui Hospital, Xi'an Jiaotong University Xi'an 710054, Shaan'xi Province, China.
Xi'an Honghui Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMesenchymal stem cells derived from human tissues have been widely used for tissue regeneration because of their strong self-renewal capacity and multi-potential properties. Autophagy plays a vital role in maintaining bone homeostasis. However, the mechanism underlying this role for autophagy in the osteogenic differentiation of mesenchymal stem cells remains to be elucidated.

methodsTwo microarray datasets were downloaded from the GEO database. Fourteen bone marrow mesenchymal stem cell samples comprising control and induction groups were selected to identify differentially expressed autophagy-related genes via multiple bioinformatics approaches, followed by functional analysis. Interactions among differentially expressed autophagy genes, miRNAs, and transcription factors were analyzed and visualized using Cytoscape software. The association between hub differentially expressed genes and autophagy was validated by qRT-PCR.

resultsTen autophagy-related genes (including

conclusionWe identified candidate molecules to further investigate their functions in osteogenesis, providing novel insights into the role of autophagy in mesenchymal stem cell differentiation.

Indexed as

Autophagydifferentially expressed genesmesenchymal stem cellsosteoblast differentiation

Identifiers

PMID36105058
PMCPMC9452348
OpenAlexW4295905513

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.