Evidence map›Paper›PMID 36104452›Full record

ArticleThe ISME journal2022

Flavobacterial exudates disrupt cell cycle progression and metabolism of the diatom Thalassiosira pseudonana.

Zinka Bartolek, Shiri Graff van Creveld, Sacha Coesel, Kelsy R Cain, Megan Schatz, Rhonda Morales, E Virginia Armbrust

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Effects ofApplied and environmental microbiology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Zinka BartolekSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0002-8701-8291
Shiri Graff van CreveldSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0002-3445-3046
Sacha CoeselSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0001-9422-8388
Kelsy R CainSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0001-8567-3340
Megan SchatzSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0003-4669-0740
Rhonda MoralesSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA.ORCID 0000-0003-0662-6234
E Virginia ArmbrustSchool of Oceanography, University of Washington, Seattle, WA, 98195, USA. armbrust@uw.edu.ORCID 0000-0001-7865-5101
University of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytoplankton and bacteria form the base of marine ecosystems and their interactions drive global biogeochemical cycles. The effects of bacteria and bacteria-produced compounds on diatoms range from synergistic to pathogenic and can affect the physiology and transcriptional patterns of the interacting diatom. Here, we investigate physiological and transcriptional changes in the marine diatom Thalassiosira pseudonana induced by extracellular metabolites of a known antagonistic bacterium Croceibacter atlanticus. Mono-cultures of C. atlanticus released compounds that inhibited diatom cell division and elicited a distinctive morphology of enlarged cells with increased chloroplast content and enlarged nuclei, similar to what was previously observed when the diatom was co-cultured with live bacteria. The extracellular C. atlanticus metabolites induced transcriptional changes in diatom pathways that include recognition and signaling pathways, cell cycle regulation, carbohydrate and amino acid production, as well as cell wall stability. Phenotypic analysis showed a disruption in the diatom cell cycle progression and an increase in both intra- and extracellular carbohydrates in diatom cultures after bacterial exudate treatment. The transcriptional changes and corresponding phenotypes suggest that extracellular bacterial metabolites, produced independently of direct bacterial-diatom interaction, may modulate diatom metabolism in ways that support bacterial growth.

Indexed as

DiatomsBacteriaCell DivisionEcosystemExudates and TransudatesPhytoplankton

Identifiers

PMID36104452
PMCPMC9666458
OpenAlexW4295763159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.