Evidence map›Paper›PMID 36104315›Full record

ArticleNature communications2022

The clinical drug candidate anle138b binds in a cavity of lipidic α-synuclein fibrils.

Leif Antonschmidt, Dirk Matthes, Rıza Dervişoğlu, Benedikt Frieg, Christian Dienemann, Andrei Leonov, Evgeny Nimerovsky, Vrinda Sant, Sergey Ryazanov, Armin Giese and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. PET imaging of alpha-synuclein: from radiotracer design through in vitro and in vivo translation.European journal of nuclear medicine and molecular imaging · 2026
    Review
  5. Article
  6. Article
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  10. Article
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  13. Neuroprotection in Parkinson Disease.Neurology and therapy · 2025
    Review
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  15. Review
  16. Article
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  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Leif Antonschmidt *NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.ORCID 0000-0001-9948-7493
Dirk Matthes *Department of Theoretical and Computational Biophysics, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
Rıza Dervişoğlu *NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.ORCID 0000-0003-0579-9088
Benedikt FriegInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.
Christian DienemannDepartment of Molecular Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.ORCID 0000-0002-2172-5110
Andrei LeonovNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
Evgeny NimerovskyNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
Vrinda SantNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
Sergey RyazanovNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
Armin GieseMODAG GmbH, Mikroforum Ring 3, 55234, Wendelsheim, Germany.
Gunnar F SchröderInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.ORCID 0000-0003-1803-5431
Stefan BeckerNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.ORCID 0000-0003-2041-5740
Bert L de GrootDepartment of Theoretical and Computational Biophysics, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany. bgroot@gwdg.de.ORCID 0000-0003-3570-3534
Christian GriesingerNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany. cigr@mpinat.mpg.de.ORCID 0000-0002-1266-4344
Loren B AndreasNMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany. land@mpinat.mpg.de.ORCID 0000-0003-3216-9065
Max Planck Institute for the Study of Religious and Ethnic Diversity · DEForschungszentrum Jülich · DEMax Planck Institute for Multidisciplinary SciencesLudwig-Maximilians-Universität München · DEMax Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aggregation of amyloidogenic proteins is a characteristic of multiple neurodegenerative diseases. Atomic resolution of small molecule binding to such pathological protein aggregates is of interest for the development of therapeutics and diagnostics. Here we investigate the interaction between α-synuclein fibrils and anle138b, a clinical drug candidate for disease modifying therapy in neurodegeneration and a promising scaffold for positron emission tomography tracer design. We used nuclear magnetic resonance spectroscopy and the cryogenic electron microscopy structure of α-synuclein fibrils grown in the presence of lipids to locate anle138b within a cavity formed between two β-strands. We explored and quantified multiple binding modes of the compound in detail using molecular dynamics simulations. Our results reveal stable polar interactions between anle138b and backbone moieties inside the tubular cavity of the fibrils. Such cavities are common in other fibril structures as well.

Indexed as

alpha-SynucleinBenzodioxolesProtein AggregatesPyrazoles3-(1,3-benzodioxol-5-yl)-5-(3-bromophenyl)-1H-pyrazolealpha-SynucleinBenzodioxolesProtein AggregatesPyrazoles

Identifiers

PMID36104315
PMCPMC9474542
OpenAlexW4295679100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.