Evidence map›Paper›PMID 36100609›Full record

ArticleNature communications2022

Paternal imprinting of dosage-effect defective1 contributes to seed weight xenia in maize.

Dawei Dai, Janaki S Mudunkothge, Mary Galli, Si Nian Char, Ruth Davenport, Xiaojin Zhou, Jeffery L Gustin, Gertraud Spielbauer, Junya Zhang, W Brad Barbazuk and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Parental dialectic: Epigenetic conversations in endosperm.Current opinion in plant biology · 2024
    Review
  10. Article
  11. Article
  12. High- or Low-Yielding FInternational journal of molecular sciences · 2024
    Article
  13. Article
  14. Transgenerational Paternal Inheritance ofInternational journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Dawei Dai *Horticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-9942-0421
Janaki S Mudunkothge *Horticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.
Mary GalliWaksman Institute, Rutgers University, Piscataway, NJ, 08854, USA.ORCID 0000-0001-7413-9409
Si Nian CharDivision of Plant Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA.ORCID 0000-0002-5759-0764
Ruth DavenportDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Xiaojin ZhouCrop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Jeffery L GustinHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-5913-0200
Gertraud SpielbauerHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.
Junya ZhangHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.
W Brad BarbazukDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Bing YangDivision of Plant Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA.ORCID 0000-0002-2293-3384
Andrea GallavottiWaksman Institute, Rutgers University, Piscataway, NJ, 08854, USA.ORCID 0000-0002-1901-2971
A Mark SettlesHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA. andrew.m.settles@nasa.gov.ORCID 0000-0002-5846-0996

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Historically, xenia effects were hypothesized to be unique genetic contributions of pollen to seed phenotype, but most examples represent standard complementation of Mendelian traits. We identified the imprinted dosage-effect defective1 (ded1) locus in maize (Zea mays) as a paternal regulator of seed size and development. Hypomorphic alleles show a 5-10% seed weight reduction when ded1 is transmitted through the male, while homozygous mutants are defective with a 70-90% seed weight reduction. Ded1 encodes an R2R3-MYB transcription factor expressed specifically during early endosperm development with paternal allele bias. DED1 directly activates early endosperm genes and endosperm adjacent to scutellum cell layer genes, while directly repressing late grain-fill genes. These results demonstrate xenia as originally defined: Imprinting of Ded1 causes the paternal allele to set the pace of endosperm development thereby influencing grain set and size.

Indexed as

Genomic ImprintingZea maysAllelesEndospermSeeds

Identifiers

PMID36100609
PMCPMC9470594

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.