Evidence map›Paper›PMID 36099310›Full record

ArticlePLoS genetics2022

Rdh54 stabilizes Rad51 at displacement loop intermediates to regulate genetic exchange between chromosomes.

Margaret Keymakh, Jennifer Dau, Jingyi Hu, Bryan Ferlez, Michael Lisby, J Brooks Crickard

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Margaret KeymakhDeparment of Molecular Biology and Genetics, Cornell University Ithaca, Ithaca, New York, United States of America.
Jennifer DauDeparment of Molecular Biology and Genetics, Cornell University Ithaca, Ithaca, New York, United States of America.
Jingyi HuDeparment of Molecular Biology and Genetics, Cornell University Ithaca, Ithaca, New York, United States of America.
Bryan FerlezDeparment of Molecular Biology and Genetics, Cornell University Ithaca, Ithaca, New York, United States of America.
Michael LisbyDepartment of Biology, University of Copenhagen, Copenhagen N, Denmark.ORCID 0000-0002-4830-5247
J Brooks CrickardDeparment of Molecular Biology and Genetics, Cornell University Ithaca, Ithaca, New York, United States of America.ORCID 0000-0002-5162-7466
Cornell University · USUniversity of Copenhagen · DK

Funding

Molecular Mechanisms of Human Homologous RecombinationR35GM142457 · NIGMS · CORNELL UNIVERSITY · PI John Brooks Crickard · 2021 to 2026
$2.3M
NIGMS NIH HHS R35 GM142457
6 · The paper itself

Abstract

Homologous recombination (HR) is a double-strand break DNA repair pathway that preserves chromosome structure. To repair damaged DNA, HR uses an intact donor DNA sequence located elsewhere in the genome. After the double-strand break is repaired, DNA sequence information can be transferred between donor and recipient DNA molecules through different mechanisms, including DNA crossovers that form between homologous chromosomes. Regulation of DNA sequence transfer is an important step in effectively completing HR and maintaining genome integrity. For example, mitotic exchange of information between homologous chromosomes can result in loss-of-heterozygosity (LOH), and in higher eukaryotes, the development of cancer. The DNA motor protein Rdh54 is a highly conserved DNA translocase that functions during HR. Several existing phenotypes in rdh54Δ strains suggest that Rdh54 may regulate effective exchange of DNA during HR. In our current study, we used a combination of biochemical and genetic techniques to dissect the role of Rdh54 on the exchange of genetic information during DNA repair. Our data indicate that RDH54 regulates DNA strand exchange by stabilizing Rad51 at an early HR intermediate called the displacement loop (D-loop). Rdh54 acts in opposition to Rad51 removal by the DNA motor protein Rad54. Furthermore, we find that expression of a catalytically inactivate allele of Rdh54, rdh54K318R, favors non-crossover outcomes. From these results, we propose a model for how Rdh54 may kinetically regulate strand exchange during homologous recombination.

Indexed as

Saccharomyces cerevisiae ProteinsChromosomesDNADNA HelicasesDNA RepairDNA TopoisomerasesRad51 RecombinaseSaccharomyces cerevisiaeDNADNA HelicasesDNA TopoisomerasesRAD51 protein, S cerevisiaeRad51 RecombinaseRDH54 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID36099310
PMCPMC9506641
OpenAlexW4295441163

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.