Evidence map›Paper›PMID 36097278›Full record

ArticleScientific reports2022

Evaluation of fluorescence-based viability stains in cells dissociated from scleractinian coral Pocillopora damicornis.

Liza M Roger, Yaa Adarkwa Darko, Tytus Bernas, Frances White, Monsurat Olaosebikan, Lenore Cowen, Judith Klein-Seetharaman, Nastassja A Lewinski

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Liza M RogerChemical and Life Science Engineering, Virginia Commonwealth University, Richmond, VA, USA. rogerlm@vcu.edu.
Yaa Adarkwa DarkoChemical and Life Science Engineering, Virginia Commonwealth University, Richmond, VA, USA.
Tytus BernasAnatomy and Neurobiology, Virginia Commonwealth University, Richmond, VA, USA.
Frances WhiteAnatomy and Neurobiology, Virginia Commonwealth University, Richmond, VA, USA.
Monsurat OlaosebikanDepartment of Computer Sciences, Tufts University, Boston, MA, USA.
Lenore CowenDepartment of Computer Sciences, Tufts University, Boston, MA, USA.
Judith Klein-SeetharamanSchool of Molecular Sciences, Arizona State University, Phoenix, AZ, USA.
Nastassja A LewinskiChemical and Life Science Engineering, Virginia Commonwealth University, Richmond, VA, USA. nalewinski@vcu.edu.

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Kim Felder Rhoads · 1985 to 2026
$51.0M
NCI NIH HHS P30 CA016059
6 · The paper itself

Abstract

The application of established cell viability assays such as the commonly used trypan blue staining method to coral cells is not straightforward due to different culture parameters and different cellular features specific to mammalian cells compared to marine invertebrates. Using Pocillopora damicornis as a model, we characterized the autofluorescence and tested different fluorescent dye pair combinations to identify alternative viability indicators. The cytotoxicity of different representative molecules, namely small organic molecules, proteins and nanoparticles (NP), was measured after 24 h of exposure using the fluorescent dye pair Hoechst 33342 and SYTOX orange. Our results show that this dye pair can be distinctly measured in the presence of fluorescent proteins plus chlorophyll. P. damicornis cells exposed for 24 h to Triton-X100, insulin or titanium dioxide (TiO

Indexed as

AnthozoaInsulinsAnimalsChlorophyllFluorescent DyesMammalsStaining and LabelingChlorophyllFluorescent DyesInsulins

Identifiers

PMID36097278
PMCPMC9468155

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.