Evidence map›Paper›PMID 36097239›Full record

ArticleJournal of medical toxicology : official journal of the American College of Medical Toxicology2022

Artificial Intelligent Context-Aware Machine-Learning Tool to Detect Adverse Drug Events from Social Media Platforms.

Don Roosan, Anandi V Law, Moom R Roosan, Yan Li

Open access · greenAbstract read
In one paragraph

Article in Journal of medical toxicology : official journal of the American College of Medical Toxicology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Don RoosanDepartment of Pharmacy Practice and Administration, Western University of Health Sciences, 309 E 2nd St, Pomona, CA, 91766, USA. droosan@westernu.edu.ORCID 0000-0003-2482-6053
Anandi V LawDepartment of Pharmacy Practice and Administration, Western University of Health Sciences, 309 E 2nd St, Pomona, CA, 91766, USA.ORCID 0000-0002-9697-2757
Moom R RoosanDepartment of Pharmacy Practice, Chapman University, 9401 Geronimo Rd, Irvine, CA, 92618, USA.ORCID 0000-0002-5318-5120
Yan LiCenter for Information Systems and Technology, Claremont Graduate University, 150 E 19th St, Claremont, CA, 91711, USA.ORCID 0000-0002-0415-0140
Western University of Health Sciences · USChapman University · USClaremont Graduate University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPharmacovigilance (PV) has proven to detect post-marketing adverse drug events (ADE). Previous research used the natural language processing (NLP) tool to extract unstructured texts relevant to ADEs. However, texts without context reduce the efficiency of such algorithms. Our objective was to develop and validate an innovative NLP tool, aTarantula, using a context-aware machine-learning algorithm to detect existing ADEs from social media using an aggregated lexicon.

methodaTarantula utilized FastText embeddings and an aggregated lexicon to extract contextual data from three patient forums (i.e., MedHelp, MedsChat, and PatientInfo) taking warfarin. The lexicon used warfarin package inserts and synonyms of warfarin ADEs from UMLS and FAERS databases. Data was stored on SQLite and then refined and manually checked by three clinical pharmacists for validation.

resultsMultiple organ systems where the most frequent ADE were reported at 1.50%, followed by CNS side effects at 1.19%. Lymphatic system ADEs were the least common side effect reported at 0.09%. The overall Spearman rank correlation coefficient between patient-reported data from the forums and FAERS was 0.19. As determined by pharmacist validation, aTarantula had a sensitivity of 84.2% and a specificity of 98%. Three clinical pharmacists manually validated our results. Finally, we created an aggregated lexicon for mining ADEs from social media.

conclusionWe successfully developed aTarantula, a machine-learning algorithmn based on artificial intelligence to extract warfarin-related ADEs from online social discussion forums automatically. Our study shows that it is feasible to use aTarantula to detect ADEs. Future researchers can validate aTarantula on the diverse dataset.

Indexed as

Drug-Related Side Effects and Adverse ReactionsSocial MediaAdverse Drug Reaction Reporting SystemsArtificial IntelligenceHumansMachine LearningPharmacovigilanceWarfarinWarfarinAdverse drug eventMachine learningNatural language processingPharmacovigilanceSocial media

Identifiers

PMID36097239
PMCPMC9492823
OpenAlexW4295427492

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.