Evidence map›Paper›PMID 36094159›Full record

ArticleeLife2022

Live-cell imaging in human colonic monolayers reveals ERK waves limit the stem cell compartment to maintain epithelial homeostasis.

Kelvin W Pond, Julia M Morris, Olga Alkhimenok, Reeba P Varghese, Carly R Cabel, Nathan A Ellis, Jayati Chakrabarti, Yana Zavros, Juanita L Merchant, Curtis A Thorne and 1 more

Abstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  10. Formation of recurring transient CaProceedings of the National Academy of Sciences of the United States of America · 2024
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  20. Multi-Aperture Transformers for 3D (MAT3D) Segmentation of Clinical and Microscopic Images.IEEE Winter Conference on Applications of Computer Vision. IEEE Winter Conference on Applications of Computer Vision
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kelvin W PondDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.ORCID 0000-0003-0519-4679
Julia M MorrisDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Olga AlkhimenokDepartment of Molecular and Cellular Biology, The University of Arizona, Tucson, United States.
Reeba P VargheseDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Carly R CabelDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Nathan A EllisDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Jayati ChakrabartiDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Yana ZavrosDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.
Juanita L MerchantDepartment of Medicine, The University of Arizona, Tucson, United States.
Curtis A ThorneDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, United States.ORCID 0000-0002-8711-8292
Andrew L PaekDepartment of Molecular and Cellular Biology, The University of Arizona, Tucson, United States.ORCID 0000-0002-2835-8544

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Teri L Bankhead · 1985 to 2026
$110.2M
Integrative Cancer Scholars Training GrantT32CA009213 · NCI · UNIVERSITY OF ARIZONA · PI CAREW, JENNIFER S, CURIEL-LEWANDROWSKI, CLARA · 1985 to 2024
$8.6M
Epigenetic dysregulation in APC-negative colorectal cancerR01CA242914 · NCI · UNIVERSITY OF ARIZONA · PI ELLIS, NATHAN A., LLOR, XAVIER · 2020 to 2024
$2.4M
Defining signaling networks in epithelial homeostasisR35GM147128 · NIGMS · UNIVERSITY OF ARIZONA · PI Curtis Andrew Thorne · 2022 to 2026
$2.0M
Dynamics of the FOXO transcription factor networkR01GM130864 · NIGMS · UNIVERSITY OF ARIZONA · PI PAEK, ANDREW LUTHER · 2019 to 2023
$1.7M
MDSC Polarization and Helicobacter-Induced Gastric MetaplasiaR01DK118563 · NIDDK · UNIVERSITY OF ARIZONA · PI MERCHANT, JUANITA L. · 2018 to 2021
$1.4M
MDSC Polarization and Helicobacter-induced Gastric MetaplasiaR56DK118563 · NIDDK · UNIVERSITY OF ARIZONA · PI MERCHANT, JUANITA L. · 2022 to 2022
$410k
NCI NIH HHS P30 CA023074NCI NIH HHS R01 CA242914NCI NIH HHS T32 CA009213NIDDK NIH HHS R01 DK118563NIDDK NIH HHS R56 DK118563NIGMS NIH HHS R01 GM130864NIGMS NIH HHS R35 GM147128Wellcome TrustWellcome Trust WT223952/Z/21/Z
6 · The paper itself

Abstract

The establishment and maintenance of different cellular compartments in tissues is a universal requirement across all metazoans. Maintaining the correct ratio of cell types in time and space allows tissues to form patterned compartments and perform complex functions. Patterning is especially evident in the human colon, where tissue homeostasis is maintained by stem cells in crypt structures that balance proliferation and differentiation. Here, we developed a human 2D patient derived organoid screening platform to study tissue patterning and kinase pathway dynamics in single cells. Using this system, we discovered that waves of ERK signaling induced by apoptotic cells play a critical role in maintaining tissue patterning and homeostasis. If ERK is activated acutely across all cells instead of in wave-like patterns, then tissue patterning and stem cells are lost. Conversely, if ERK activity is inhibited, then stem cells become unrestricted and expand dramatically. This work demonstrates that the colonic epithelium requires coordinated ERK signaling dynamics to maintain patterning and tissue homeostasis. Our work reveals how ERK can antagonize stem cells while supporting cell replacement and the function of the gut.

Indexed as

ColonStem CellsCell ProliferationHomeostasisHumansIntestinal Mucosaapoptosiscell biologycoloncryptdevelopmental biologyepitheliumhomeostasishumanstem cells

Identifiers

PMID36094159
PMCPMC9499537

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.