Evidence map›Paper›PMID 36092414›Full record

ArticleFrontiers in plant science2022

Transcriptome-wide analyses of RNA m6A methylation in hexaploid wheat reveal its roles in mRNA translation regulation.

Tao Huang, Wei-Jie He, Cheng Li, Jing-Bo Zhang, Yu-Cai Liao, Bo Song, Peng Yang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The mFrontiers in plant science · 2026
    Review
  5. Review
  6. Review
  7. Role of mEpigenomes · 2025
    Review
  8. Article
  9. Transcriptome-WidePlants (Basel, Switzerland) · 2024
    Article
  10. ExploringHorticulture research · 2024
    Article
  11. Detection, distribution, and functions of RNAFrontiers in plant science · 2024
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Tao HuangMolecular Biotechnology Laboratory of Triticeae Crops, Huazhong Agricultural University, Wuhan, China.
Wei-Jie HeMolecular Biotechnology Laboratory of Triticeae Crops, Huazhong Agricultural University, Wuhan, China.
Cheng LiCollege of Agriculture, Shihezi University, Shihezi, China.
Jing-Bo ZhangMolecular Biotechnology Laboratory of Triticeae Crops, Huazhong Agricultural University, Wuhan, China.
Yu-Cai LiaoMolecular Biotechnology Laboratory of Triticeae Crops, Huazhong Agricultural University, Wuhan, China.
Bo SongShenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China.
Peng YangMolecular Biotechnology Laboratory of Triticeae Crops, Huazhong Agricultural University, Wuhan, China.
Huazhong Agricultural University · CNAgricultural Genomics Institute at Shenzhen · CNShihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N6-methyladenosine (m6A) is the most abundant RNA modification in eukaryotic messenger RNAs. m6A was discovered in wheat about 40 years ago; however, its potential roles in wheat remain unknown. In this study, we profiled m6As in spikelets transcriptome at the flowering stage of hexaploid wheat and found that m6As are evenly distributed across the A, B, and D subgenomes but their extents and locations vary across homeologous genes. m6As are enriched in homeologous genes with close expression levels and the m6A methylated genes are more conserved. The extent of m6A methylation is negatively correlated with mRNA expression levels and its presence on mRNAs has profound impacts on mRNA translation in a location-dependent manner. Specifically, m6As within coding sequences and 3'UTRs repress the translation of mRNAs while the m6As within 5'UTRs and start codons could promote it. The m6A-containing mRNAs are significantly enriched in processes and pathways of "translation" and "RNA transport," suggesting the potential role of m6As in regulating the translation of genes involved in translation regulation. Our data also show a stronger translation inhibition by small RNAs (miRNA and phasiRNA) than by m6A methylation, and no synergistical effect between the two was observed. We propose a secondary amplification machinery of translation regulation triggered by the changes in m6A methylation status. Taken together, our results suggest translation regulation as a key role played by m6As in hexaploid wheat.

Indexed as

m6AN6-methyladenosineRNA modificationsmall RNAtranslationwheat

Identifiers

PMID36092414
PMCPMC9453602
OpenAlexW4293091609

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.