Evidence map›Paper›PMID 36091637›Full record

ArticleChaos, solitons, and fractals2022

Stochastic SIR model predicts the evolution of COVID-19 epidemics from public health and wastewater data in small and medium-sized municipalities: A one year study.

Manuel Pájaro, Noelia M Fajar, Antonio A Alonso, Irene Otero-Muras

Open access · hybridAbstract read
In one paragraph

Article in Chaos, solitons, and fractals, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Manuel PájaroBioProcess Engineering Group, IIM-CSIC. Spanish National Research Council, Eduardo Cabello 6, 36208, Vigo, Spain.
Noelia M FajarBioProcess Engineering Group, IIM-CSIC. Spanish National Research Council, Eduardo Cabello 6, 36208, Vigo, Spain.
Antonio A AlonsoBioProcess Engineering Group, IIM-CSIC. Spanish National Research Council, Eduardo Cabello 6, 36208, Vigo, Spain.
Irene Otero-MurasBioProcess Engineering Group, IIM-CSIC. Spanish National Research Council, Eduardo Cabello 6, 36208, Vigo, Spain.
Consejo Superior de Investigaciones Científicas · ESUniversidade da Coruña · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The level of unpredictability of the COVID-19 pandemics poses a challenge to effectively model its dynamic evolution. In this study we incorporate the inherent stochasticity of the SARS-CoV-2 virus spread by reinterpreting the classical compartmental models of infectious diseases (SIR type) as chemical reaction systems modeled via the Chemical Master Equation and solved by Monte Carlo Methods. Our model predicts the evolution of the pandemics at the level of municipalities, incorporating for the first time (i) a variable infection rate to capture the effect of mitigation policies on the dynamic evolution of the pandemics (ii) SIR-with-jumps taking into account the possibility of multiple infections from a single infected person and (iii) data of viral load quantified by RT-qPCR from samples taken from Wastewater Treatment Plants. The model has been successfully employed for the prediction of the COVID-19 pandemics evolution in small and medium size municipalities of Galicia (Northwest of Spain).

Indexed as

Chemical master equationCOVID-19SARS-coV-2SIR modelStochastic mechanistic modelStochastic simulation algorithm

Identifiers

PMID36091637
PMCPMC9448700
OpenAlexW4295472514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.