Evidence map›Paper›PMID 36091211›Full record

ArticleChemical science2022

The rippled β-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.

Amaruka Hazari, Michael R Sawaya, Niko Vlahakis, Timothy C Johnstone, David Boyer, Jose Rodriguez, David Eisenberg, Jevgenij A Raskatov

Abstract read
In one paragraph

Article in Chemical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. The Rippled Beta-Sheet: An Old Prediction Inspires a New Field.Chembiochem : a European journal of chemical biology · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Amaruka HazariDept. of Chemistry and Biochemistry, UCSC 1156 High Street Santa Cruz CA 95064 USA jraskato@ucsc.edu.
Michael R SawayaDept. of Chemistry and Biochemistry, UCLA 607 Charles E. Young Drive East Box 951569 Los Angeles CA 90095-1569 USA.
Niko VlahakisDept. of Chemistry and Biochemistry, UCLA 607 Charles E. Young Drive East Box 951569 Los Angeles CA 90095-1569 USA.
Timothy C JohnstoneDept. of Chemistry and Biochemistry, UCSC 1156 High Street Santa Cruz CA 95064 USA jraskato@ucsc.edu.ORCID https://orcid.org/0000-0003-3615-4530
David BoyerDept. of Chemistry and Biochemistry, UCLA 607 Charles E. Young Drive East Box 951569 Los Angeles CA 90095-1569 USA.
Jose RodriguezDept. of Chemistry and Biochemistry, UCLA 607 Charles E. Young Drive East Box 951569 Los Angeles CA 90095-1569 USA.
David EisenbergDept. of Chemistry and Biochemistry, UCLA 607 Charles E. Young Drive East Box 951569 Los Angeles CA 90095-1569 USA.
Jevgenij A RaskatovDept. of Chemistry and Biochemistry, UCSC 1156 High Street Santa Cruz CA 95064 USA jraskato@ucsc.edu.ORCID https://orcid.org/0000-0002-0082-9113

Funding

Towards Treatment of Alzheimer’s Disease by Targeting Pathogenic Tau and Beta-Amyloid StructuresR01AG070895 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DAVID EISENBERG · 2022 to 2026
$5.8M
Using Chirality to Understand and Control Amyloid Beta Neuronal Uptake and ToxicityR01AG074954 · NIA · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Jevgenij Raskatov · 2022 to 2026
$1.9M
NIA NIH HHS R01 AG070895NIA NIH HHS R01 AG074954
6 · The paper itself

Abstract

The rippled β-sheet is a peptidic structural motif related to but distinct from the pleated β-sheet. Both motifs were predicted in the 1950s by Pauling and Corey. The pleated β-sheet was since observed in countless proteins and peptides and is considered common textbook knowledge. Conversely, the rippled β-sheet only gained a meaningful experimental foundation in the past decade, and the first crystal structural study of rippled β-sheets was published as recently as this year. Noteworthy, the crystallized assembly stopped at the rippled β-dimer stage. It did not form the extended, periodic rippled β-sheet layer topography hypothesized by Pauling and Corey, thus calling the validity of their prediction into question. NMR work conducted since moreover shows that certain model peptides rather form pleated and not rippled β-sheets in solution. To determine whether the periodic rippled β-sheet layer configuration is viable, the field urgently needs crystal structures. Here we report on crystal structures of two racemic and one quasi-racemic aggregating peptide systems, all of which yield periodic rippled antiparallel β-sheet layers that are in excellent agreement with the predictions by Pauling and Corey. Our study establishes the rippled β-sheet layer configuration as a motif with general features and opens the road to structure-based design of unique supramolecular architectures.

Identifiers

PMID36091211
PMCPMC9365095

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.