Evidence map›Paper›PMID 36090173›Full record

ArticleFrontiers in veterinary science2022

Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak.

Yaying Wang, Yangyang Pan, Meng Wang, Seth Yaw Afedo, Ling Zhao, Xiaohong Han, Minqing Liu, Tian Zhao, Tongxiang Zhang, Tianyi Ding and 3 more

Abstract read
In one paragraph

Article in Frontiers in veterinary science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yaying WangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Yangyang PanCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Meng WangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Seth Yaw AfedoCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Ling ZhaoCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Xiaohong HanCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Minqing LiuCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Tian ZhaoCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Tongxiang ZhangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Tianyi DingCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Jinglei WangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Yan CuiCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.
Sijiu YuCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we detected the expression of mRNAs, lncRNAs, and miRNAs in primary cultured leydig cells (LCs) and sertoli cells (SCs) of yak by RNA sequencing technology. A total of 84 differently expression mRNAs (DEmRNAs) (LCs vs. SCs: 15 up and 69 down), 172 differently expression lncRNAs (DElncRNAs) (LCs vs. SCs: 36 up and 136 down), and 90 differently expression miRNAs (DEmiRNAs) (LCs vs. SCs: 72 up and 18 down) were obtained between the two types of cells. GO enrichment and KEGG analysis indicated that the differential expression genes (DEGs) were more enriched in the regulation of actin cytoskeleton, Rap1/MAPK signaling pathway, steroid biosynthesis, focal adhesion, and pathways associated with metabolism. Targeted regulation relationship pairs of 3β-HSD and MSTRG.54630.1, CNTLN and MSTRG.19058.1, BRCA2 and MSTRG.28299.4, CA2 and novel-miR-148, and ceRNA network of LAMC3-MSTRG.68870.1- bta-miR-7862/novel-miR-151/novel-miR-148 were constructed by Cytoscape software. In conclusion, the differences between LCs and SCs were mainly reflected in steroid hormone synthesis, cell proliferation and metabolism, and blood-testicular barrier (BTB) dynamic regulation, and 3β-HSD, CNTLN, BRCA2, CA2, and LAMC3 may be the key factors causing these differences, which may be regulated by ncRNAs. This study provides a basic direction for exploring the differential regulation of LCs and SCs by ncRNAs.

Indexed as

differential analysisLCsRNA sequenceSCstestisyak

Identifiers

PMID36090173
PMCPMC9449347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.