Evidence map›Paper›PMID 36088419›Full record

ArticleReproductive health2022

A novel homozygous mutation in the PADI6 gene causes early embryo arrest.

Xiaoxia Wang, Huimin Zhu, Yi He, Jun Zeng, Jing Zhao, Qiuping Xia, Lingqian Wu, Zhongyuan Yao, Yanping Li

Open access · goldAbstract read
In one paragraph

Article in Reproductive health, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. The Mammalian Oocyte: A Central Hub for Cellular Reprogramming and Stemness.Stem cells and cloning : advances and applications · 2025
    Review
  4. A novel homozygous mutation in the NLRP2 gene causes early embryonic arrest.Journal of assisted reproduction and genetics · 2024
    Article
  5. Article
  6. Advances in the genetic etiology of female infertility.Journal of assisted reproduction and genetics · 2024
    Review
  7. PADI6: What we know about the elusive fifth member of the peptidyl arginine deiminase family.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. A complex heterozygous mutation inFrontiers in genetics · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xiaoxia Wang *Department of Reproductive Medicine, Xiangya Hospital, Central South University, Changsha, 410000, Hunan, China.
Huimin Zhu *Center for Medical Genetics & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, 410078, Hunan, China.
Yi HeDepartment of Neurosurgery, Xiangya Hospital, Central South University, Changsha, 410008, Hunan, China.
Jun ZengDepartment of Reproductive Medicine, Xiangya Hospital, Central South University, Changsha, 410000, Hunan, China.
Jing ZhaoDepartment of Reproductive Medicine, Xiangya Hospital, Central South University, Changsha, 410000, Hunan, China.
Qiuping XiaDepartment of Reproductive Medicine, Xiangya Hospital, Central South University, Changsha, 410000, Hunan, China.
Lingqian WuCenter for Medical Genetics & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, 410078, Hunan, China.
Zhongyuan YaoCenter for Medical Genetics & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, 410078, Hunan, China. 32694395@qq.com.
Yanping LiDepartment of Reproductive Medicine, Xiangya Hospital, Central South University, Changsha, 410000, Hunan, China. liyanp@csu.edu.cn.ORCID http://orcid.org/0000-0002-4193-7321
Central South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIt has been proved that mutations in the PADI6 gene can cause early embryo arrest. This study describes a newly discovered mutation in PADI6 that expands the genetic spectrum of early embryo arrest.

methodsPeripheral blood of a patient diagnosed with early embryo arrest was collected for whole-exome sequencing. Sanger sequencing was performed to confirm this mutation. The effects of the variant were investigated in human embryonic kidney 293T (HEK293T) cells using western blotting, real-time quantitative polymerase chain reaction, and immunofluorescence.

resultsA novel homozygous mutation in PADI6 was identified in the proband. The patient carried a frameshift insertion mutation c.558dupA (p.Thr187Asnfs*48), which was located in the protein arginine deiminase middle domain. The variant destroyed PADI6 protein expression and reduced PADI6 mRNA expression in HEK293T cells.

conclusionsThe newly identified mutation in PADI6 accounts for early embryo arrest. It expands the spectrum of genetic causes and phenotypes of infertility in humans. These findings also provide an additional possible diagnostic marker for patients with recurrent in vitro fertilization/intracytoplasmic sperm injection failure.

Indexed as

Embryonic DevelopmentFemaleHEK293 CellsHomozygoteHumansInfertilityMutationProtein-Arginine Deiminase Type 6PADI6 protein, humanProtein-Arginine Deiminase Type 6Early embryo arrestInfertilityMutationPeptidylarginine deiminase type VISubcortical maternal complex

Identifiers

PMID36088419
PMCPMC9463787
OpenAlexW4295431582

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.