Evidence map›Paper›PMID 36087196›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Discovery of HLA-E-Presented Epitopes: MHC-E/Peptide Binding and T-Cell Recognition.

Paula Ruibal, Kees L M C Franken, Krista E van Meijgaarden, Lucy C Walters, Andrew J McMichael, Geraldine M Gillespie, Simone A Joosten, Tom H M Ottenhoff

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2024
    Article
  7. iScience · 2024
    Article
  8. Article
  9. HLA-E/Frontiers in immunology · 2024
    Article
  10. Human leukocyte antigen and tumor immunotherapy (Review).International journal of oncology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Paula RuibalDepartment of Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.
Kees L M C FrankenDepartment of Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.
Krista E van MeijgaardenDepartment of Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.
Lucy C WaltersNuffield Department of Medicine Research Building, Old Road Campus, Roosevelt Drive, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Andrew J McMichaelNuffield Department of Medicine Research Building, Old Road Campus, Roosevelt Drive, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Geraldine M GillespieNuffield Department of Medicine Research Building, Old Road Campus, Roosevelt Drive, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Simone A Joosten *Department of Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.
Tom H M Ottenhoff *Department of Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands. t.h.m.ottenhoff@lumc.nl.
Leiden University Medical Center · NLUniversity of Oxford · GB

Funding

Collaboratory of AIDS Researchers for Eradication (CARE)UM1AI164567 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAVID M. MARGOLIS · 2021 to 2026
$31.6M
Collaboratory of AIDS Researchers for Eradication (CARE)UM1AI126619 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MARGOLIS, DAVID M. · 2016 to 2020
$23.2M
HLA-E restricted T-cell immunity in Mycobacterium tuberculosis infectionR01AI141315 · NIAID · LEIDEN UNIVERSITY MEDICAL CENTER · PI JOOSTEN, SIMONE ANNE · 2019 to 2022
$1.7M
In depth characterization of Mtb specific HLA-E restricted human CD8+ T-cellsR21AI127133 · NIAID · LEIDEN UNIVERSITY MEDICAL CENTER · PI OTTENHOFF, TOM · 2016 to 2017
$281k
Medical Research Council MR/M019837/1NIAID NIH HHS R01 AI141315NIAID NIH HHS R21 AI127133NIAID NIH HHS UM1 AI126619NIAID NIH HHS UM1 AI164567
6 · The paper itself

Abstract

Understanding the interactions involved during the immunological synapse between peptide, HLA-E molecules, and TCR is crucial to effectively target protective HLA-E-restricted T-cell responses in humans. Here we describe three techniques based on the generation of MHC-E/peptide complexes (MHC-E generically includes HLA-E-like molecules in human and nonhuman species, while HLA-E specifically refers to human molecules), which allow to investigate MHC-E/peptide binding at the molecular level through binding assays and by using peptide loaded HLA-E tetramers, to detect, isolate, and study peptide-specific HLA-E-restricted human T-cells.

Indexed as

Histocompatibility Antigens Class IT-LymphocytesEpitopesHLA-E AntigensHumansPeptidesEpitopesHistocompatibility Antigens Class IHLA-E AntigensPeptidesBinding motifHLA-EMHC-EPeptide bindingT-cellT-cell epitopeTetramer

Identifiers

PMID36087196
PMCPMC10508831
OpenAlexW4295477357

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.