Evidence map›Paper›PMID 36084813›Full record

ArticleJournal of advanced research2023

Exploring genetic diversity of wild and related tetraploid wheat species Triticum turgidum and Triticum timopheevii.

Inderjit S Yadav, Narinder Singh, Shuangye Wu, Jon Raupp, Duane L Wilson, Nidhi Rawat, Bikram S Gill, Jesse Poland, Vijay K Tiwari

Abstract read
In one paragraph

Article in Journal of advanced research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. GBS-based identification ofFrontiers in plant science · 2026
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Inderjit S YadavDepartment of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD 20742, USA.
Narinder SinghBayer R&D Services LLC, Kansas City, MO 64153, USA.
Shuangye WuDepartment of Plant Pathology and Wheat Genetics Resource Center, Kansas State University, 1712 Claflin Road, Manhattan, KS 66506, USA.
Jon RauppDepartment of Plant Pathology and Wheat Genetics Resource Center, Kansas State University, 1712 Claflin Road, Manhattan, KS 66506, USA.
Duane L WilsonDepartment of Plant Pathology and Wheat Genetics Resource Center, Kansas State University, 1712 Claflin Road, Manhattan, KS 66506, USA.
Nidhi RawatDepartment of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD 20742, USA.
Bikram S GillDepartment of Plant Pathology and Wheat Genetics Resource Center, Kansas State University, 1712 Claflin Road, Manhattan, KS 66506, USA.
Jesse PolandBiological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, 4700 KAUST, Thuwal 23955-6900, Saudi Arabia.
Vijay K TiwariDepartment of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD 20742, USA. Electronic address: vktiwari@umd.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe domestication bottleneck has reduced genetic diversity inwheat, necessitating the use of wild relatives in breeding programs. Wild tetraploid wheat are widely used in the breeding programs but with morphological characters, it is difficult to distinguish these, resulting in misclassification/mislabeling or duplication of accessions in the Gene bank.

objectivesThe study aims to exploreGenotyping by sequencing (GBS) to characterize wild and domesticated tetraploid wheat accessions to generate a core set of accessions to be used in the breeding program.

methodsTASSEL-GBS pipeline was used for SNP discovery, fastStructure was used to determine the population structure and PowerCore was used to generate a core sets. Nucleotide diversity matrices of Nie's and F-statistics (F

resultsWe found 65 % and 47 % duplicated accessions in Triticum timopheevii and T. turgidum respectively. Genome-wide nucleotide diversity and F

conclusionThe present study explored the potential of GBS technology in data reduction while maintaining the significant genetic diversity of the species. Wild germplasm showed more differentiation than domesticated accessions, indicating the availability of sufficient diversity for crop improvement. With reduced complexity, the core set preserves the genetic diversity of the gene bank collections and will aid in a more robust characterization of wild germplasm.

Indexed as

Genome-Wide Association StudyTriticumNucleotidesPlant BreedingTetraploidyNucleotidesCore collectionF-statistics: (F(ST))Genetic diversityGenome wide association study (GWAS)Genotyping by sequencing (GBS)Nei’s indexPhenotypePopulation structureSequencingTetraploid wheatTriticum

Identifiers

PMID36084813
PMCPMC10248793

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.