Evidence map›Paper›PMID 36084148›Full record

Observational studyPLoS neglected tropical diseases2022

Epidemiology of infection by pulmonary non-tuberculous mycobacteria in French Guiana 2008-2018.

Milène Chaptal, Claire Andrejak, Timothée Bonifay, Emmanuel Beillard, Geneviève Guillot, Stéphanie Guyomard-Rabenirina, Magalie Demar, Sabine Trombert-Paolantoni, Veronique Jacomo, Emilie Mosnier and 4 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in PLoS neglected tropical diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Variability ofAntibiotics (Basel, Switzerland) · 2022
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 4 countries.

Milène ChaptalTropical and Infectious Diseases Department, Andrée Rosemon Hospital, Cayenne, French Guiana.ORCID 0000-0002-3394-4521
Claire AndrejakPneumology Department, University Hospital, Amiens, France.
Timothée BonifayPenitentiary ambulatory care and consultation unit, Andrée Rosemon Hospital, Cayenne, French Guiana.
Emmanuel BeillardPasteur Institute of Guiana, Cayenne, French Guiana.
Geneviève GuillotMedical Department, Andrée Rosemon Hospital, Cayenne, Guyane française.
Stéphanie Guyomard-RabenirinaTransmission, Reservoir and Diversity of Pathogens Unit, Pasteur Institute of Guadeloupe, Les Abymes, Guadeloupe.ORCID 0000-0002-3925-2710
Magalie DemarLaboratory, Andrée Rosemon Hospital, Cayenne, French Guiana.
Sabine Trombert-PaolantoniCerba Europeanlab, St Ouen l'Aumone, France.ORCID 0000-0001-7004-0292
Veronique JacomoBiomnis Laboratory, Lyon, France.
Emilie MosnierTropical and Infectious Diseases Department, Andrée Rosemon Hospital, Cayenne, French Guiana.ORCID 0000-0002-6004-3323
Nicolas VezirisSorbonne Université, INSERM U1135, Centre d'Immunologie et des Maladies Infectieuses (CIMI-Paris), Centre National de Référence des Mycobactéries et de la Résistance des Mycobactéries aux Antituberculeux, Département de Bactériologie, Groupe hospitalier APHP, Sorbonne Université, Site Saint-Antoine, Paris, France.ORCID 0000-0001-5660-6544
Felix DjossouTropical and Infectious Diseases Department, Andrée Rosemon Hospital, Cayenne, French Guiana.
Loïc EpelboinTropical and Infectious Diseases Department, Andrée Rosemon Hospital, Cayenne, French Guiana.
French Guiana PNTM working group
Centre Hospitalier Andrée Rosemon · GFInserm · FRbioMérieux (France) · FRCentre Hospitalier Universitaire Amiens-Picardie · FRInstitut Pasteur de la Guadeloupe · GPInstitut Pasteur de la Guyane · GFVirbac (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionUnlike diseases caused by Mycobacterium tuberculosis, M. leprae and M. ulcerans, the epidemiology of pulmonary non-tuberculous mycobacteria (PNTM) has not received due attention in French Guiana. The main objective of the current study was to define the incidence of these PNTM infections: NTM pulmonary diseases (NTM-PD) and casual PNTM isolation (responsible of latent infection or simple colonization). The secondary objectives were to determine species diversity and geographic distribution of these atypical mycobacteria.

methodsA retrospective observational study (2008-2018) of French Guiana patients with at least one PNTM positive respiratory sample in culture was conducted. Patients were then classified into two groups: casual PNTM isolation or pulmonary disease (NTM-PD), according to clinical, radiological and microbiological criteria defined by the American Thoracic Society / Infectious Disease Society of America (ATS / IDSA) in 2007.

results178 patients were included, out of which 147 had casual PNTM isolation and 31 had NTM-PD. Estimated annual incidence rate of respiratory isolates was 6.17 / 100,000 inhabitants per year while that of NTM-PD was 1.07 / 100,000 inhabitants per year. Among the 178 patients, M. avium complex (MAC) was the most frequently isolated pathogen (38%), followed by M. fortuitum then M. abscessus (19% and 6% of cases respectively), the latter two mycobacteria being mainly found in the coastal center region. Concerning NTM-PD, two species were mainly involved: MAC (81%) and M. abscessus (16%). DISCUSSION/

conclusionThis is the first study on the epidemiology of PNTM infections in French Guiana. PNTM's incidence looks similar to other contries and metropolitan France and NTM-PD is mostly due to MAC and M.abscessus. Although French Guiana is the French territory with the highest tuberculosis incidence, NTM should not be overlooked.

Indexed as

Lung DiseasesMycobacteriumMycobacterium Infections, NontuberculousFrench GuianaHumansLungNontuberculous Mycobacteria

Identifiers

PMID36084148
PMCPMC9491559
OpenAlexW4295037728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.