Evidence map›Paper›PMID 36081788›Full record

ArticleFrontiers in microbiology2022

Differential effect of SARS-CoV-2 infection on stress granule formation in Vero and Calu-3 cells.

Dongbum Kim, Sony Maharjan, Mijeong Kang, Jinsoo Kim, Sangkyu Park, Minyoung Kim, Kyeongbin Baek, Suyeon Kim, Jun Gyo Suh, Younghee Lee and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

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  10. Analysis of spike protein variants evolved in a novelFrontiers in cellular and infection microbiology · 2023
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  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Dongbum KimInstitute of Medical Science, College of Medicine, Hallym University, Chuncheon, South Korea.
Sony MaharjanInstitute of Medical Science, College of Medicine, Hallym University, Chuncheon, South Korea.
Mijeong KangDepartment of Microbiology, College of Medicine, Hallym University, Chuncheon, South Korea.
Jinsoo KimDepartment of Microbiology, College of Medicine, Hallym University, Chuncheon, South Korea.
Sangkyu ParkDepartment of Biochemistry, College of Natural Sciences, Chungbuk National University, Cheongju, South Korea.
Minyoung KimDepartment of Microbiology, College of Medicine, Hallym University, Chuncheon, South Korea.
Kyeongbin BaekDepartment of Microbiology, College of Medicine, Hallym University, Chuncheon, South Korea.
Suyeon KimDepartment of Microbiology, College of Medicine, Hallym University, Chuncheon, South Korea.
Jun Gyo SuhDepartment of Medical Genetics, College of Medicine, Hallym University, Chuncheon, South Korea.
Younghee LeeDepartment of Biochemistry, College of Natural Sciences, Chungbuk National University, Cheongju, South Korea.
Hyung-Joo KwonInstitute of Medical Science, College of Medicine, Hallym University, Chuncheon, South Korea.
Hallym University · KRChungbuk National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stress granule formation is induced by numerous environmental stressors, including sodium arsenite treatment and viral infection. Accordingly, stress granules can inhibit viral propagation and function as part of the antiviral host response to numerous viral infections. Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) antagonizes stress granule formation, in part, via interaction between SARS-CoV-2 nucleocapsid (N) protein and Ras-GTPase-activating SH3-domain-binding protein 1 (G3BP1). However, it is unclear whether there are differential effects in different cell types. In this study, we assessed interaction between the N protein of SARS-CoV-2 S clade and G3BP1/2 in Vero and Calu-3 cells and investigated the effect of various SARS-CoV-2 strains on sodium arsenite-induced stress granule formation. Our data show that SARS-CoV-2 S clade N protein interacts with both G3BP1 and G3BP2 more strongly in Calu-3

Indexed as

COVID-19G3BP1/2N proteinSARS-CoV-2sodium arsenitestress granule

Identifiers

PMID36081788
PMCPMC9445554
OpenAlexW4292836182

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.