Evidence map›Paper›PMID 36080168›Full record

ArticleMolecules (Basel, Switzerland)2022

In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes.

Alexey V Rayevsky, Andrii S Poturai, Iryna O Kravets, Alexander E Pashenko, Tatiana A Borisova, Ganna M Tolstanova, Dmitriy M Volochnyuk, Petro O Borysko, Olga B Vadzyuk, Diana O Alieksieieva and 6 more

Abstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Role of Computer-Aided Drug Design in Drug Development.Molecules (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Alexey V RayevskyEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.
Andrii S PoturaiEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.ORCID 0000-0002-3991-0920
Iryna O KravetsEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.
Alexander E PashenkoEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.ORCID 0000-0001-6157-0785
Tatiana A BorisovaPalladin Institute of Biochemistry of the National Academy of Sciences of Ukraine, 9 Leontovitcha Street, 01054 Kyiv, Ukraine.
Ganna M TolstanovaEducational and Scientific Institute of High Technologies, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Street, 01033 Kyiv, Ukraine.
Dmitriy M VolochnyukEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.
Petro O BoryskoEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.ORCID 0000-0002-5840-5233
Olga B VadzyukEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.
Diana O AlieksieievaEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.ORCID 0000-0001-7807-1181
Yuliana ZabolotnaLaboratory of Chemoinformatics, University of Strasbourg, 4, rue B. Pascal, 67081 Strasbourg, France.
Olga KlimchukLaboratory of Chemoinformatics, University of Strasbourg, 4, rue B. Pascal, 67081 Strasbourg, France.
Dragos HorvathLaboratory of Chemoinformatics, University of Strasbourg, 4, rue B. Pascal, 67081 Strasbourg, France.ORCID 0000-0003-0173-5714
Gilles MarcouLaboratory of Chemoinformatics, University of Strasbourg, 4, rue B. Pascal, 67081 Strasbourg, France.ORCID 0000-0003-1676-6708
Sergey V RyabukhinEnamine Ltd., 78 Chervonotkatska Street, 02660 Kyiv, Ukraine.ORCID 0000-0003-4281-8268
Alexandre VarnekLaboratory of Chemoinformatics, University of Strasbourg, 4, rue B. Pascal, 67081 Strasbourg, France.ORCID 0000-0003-1886-925X

Funding

Ministry of Education and Science of Ukraine 0122U200284National Research Foundation of Ukraine 0120U105188PHC DNIPRO 2021 46939PC
6 · The paper itself

Abstract

New models for ACE2 receptor binding, based on QSAR and docking algorithms were developed, using XRD structural data and ChEMBL 26 database hits as training sets. The selectivity of the potential ACE2-binding ligands towards Neprilysin (NEP) and ACE was evaluated. The Enamine screening collection (3.2 million compounds) was virtually screened according to the above models, in order to find possible ACE2-chemical probes, useful for the study of SARS-CoV2-induced neurological disorders. An enzymology inhibition assay for ACE2 was optimized, and the combined diversified set of predicted selective ACE2-binding molecules from QSAR modeling, docking, and ultrafast docking was screened in vitro. The in vitro hits included two novel chemotypes suitable for further optimization.

Indexed as

Angiotensin-Converting Enzyme 2COVID-19HumansMolecular Docking SimulationPeptidyl-Dipeptidase ARNA, ViralSARS-CoV-2Angiotensin-Converting Enzyme 2Peptidyl-Dipeptidase ARNA, Viralangiotensin-converting enzymeblood-brain barrier penetrationenzymology inhibition assay adjustmentin vitro studiesmolecular dockingNeprilysinQSAR modelingselective ACE2 enzyme binding

Identifiers

PMID36080168
PMCPMC9458095

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.