Evidence map›Paper›PMID 36077272›Full record

ArticleInternational journal of molecular sciences2022

TRIM28 Is a Novel Regulator of CD133 Expression Associated with Cancer Stem Cell Phenotype.

Yan S Kim, Daria M Potashnikova, Alisa M Gisina, Irina V Kholodenko, Arthur T Kopylov, Olga V Tikhonova, Leonid K Kurbatov, Aleena A Saidova, Anna V Tvorogova, Roman V Kholodenko and 5 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Multifaceted role ofMedComm · 2024
    Review
  6. Can CD133 Be Regarded as a Prognostic Biomarker in Oncology: Pros and Cons.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Yan S KimLaboratory of Cell Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-7032-6781
Daria M PotashnikovaCell Biology and Histology Department, School of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0002-0098-827X
Alisa M GisinaLaboratory of Cell Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Irina V KholodenkoLaboratory of Cell Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-4079-5210
Arthur T KopylovLaboratory of Systems Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-7199-372X
Olga V TikhonovaLaboratory of Systems Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-2810-566X
Leonid K KurbatovTranscriptome Analysis Group, Analytical Branch Department, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Aleena A SaidovaCell Biology and Histology Department, School of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0003-3294-7146
Anna V TvorogovaLaboratory of Cell Motility, A.N. Belozersky Research Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, 119992 Moscow, Russia.
Roman V KholodenkoLaboratory of Molecular Immunology, M.M. Shemyakin-Yu.A. Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 117997 Moscow, Russia.ORCID 0000-0001-6083-6588
Pavel V BelousovEndocrinology Research Centre, 117292 Moscow, Russia.
Ivan A VorobjevLaboratory of Cell Motility, A.N. Belozersky Research Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, 119992 Moscow, Russia.
Victor G ZgodaLaboratory of Systems Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-4532-4274
Konstantin N YaryginLaboratory of Cell Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.ORCID 0000-0002-2261-851X
Alexey Yu LupatovLaboratory of Cell Biology, V.N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Institute of Biomedical Chemistry · RULomonosov Moscow State University · RUEngelhardt Institute of Molecular Biology · RUInstitute of Bioorganic Chemistry · RU

Funding

Ministry of Science and Higher Education of the Russian Federation 75-15-2022-305
6 · The paper itself

Abstract

CD133 is an extensively studied marker of the most malignant tumor cell population, designated as cancer stem cells (CSCs). However, the function of this glycoprotein and its involvement in cell regulatory cascades are still poorly understood. Here we show a positive correlation between the level of CD133 plasma membrane expression and the proliferative activity of cells of the Caco-2, HT-29, and HUH7 cancer cell lines. Despite a substantial difference in the proliferative activities of cell populations with different levels of CD133 expression, transcriptomic and proteomic profiling revealed only minor distinctions between them. Nonetheless, a further in silico assessment of the differentially expressed transcripts and proteins revealed 16 proteins that could be involved in the regulation of CD133 expression; these were assigned ranks reflecting the apparent extent of their involvement. Among them, the TRIM28 transcription factor had the highest rank. The prominent role of TRIM28 in CD133 expression modulation was confirmed experimentally in the Caco2 cell line clones: the knockout, though not the knockdown, of the

Indexed as

AC133 AntigenCaco-2 CellsCell Line, TumorGene Expression Regulation, NeoplasticHumansNeoplasmsNeoplastic Stem CellsPhenotypeProteomicsTranscription FactorsTripartite Motif-Containing Protein 28AC133 AntigenPROM1 protein, humanTranscription FactorsTRIM28 protein, humanTripartite Motif-Containing Protein 28cancer stem cellsCD133cell signalingstemness markersTRIM28

Identifiers

PMID36077272
PMCPMC9456468
OpenAlexW4293773555

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.