ArticleJournal of biomedical semantics2022
Pathling: analytics on FHIR.
Article in Journal of biomedical semantics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Benchmarking Fast Healthcare Interoperability Resources-Based Analytics: Quantitative Study of RESTful Server Queries and Big Data Engines.JMIR medical informatics · 2026Article
- Spezi Data Pipeline: Streamlining FHIR-based interoperable digital health data workflows.NPJ digital medicine · 2026Article
- SQL on FHIR - Tabular views of FHIR data using FHIRPath.NPJ digital medicine · 2025Article
- Bridging Data Silos in Oncology with Modular Software for Federated Analysis on Fast Healthcare Interoperability Resources: Multisite Implementation Study.Journal of medical Internet research · 2025Article
- Bridging Data Models in Health Care With a Novel Intermediate Query Format for Feasibility Queries: Mixed Methods Study.JMIR medical informatics · 2024Article
- Article
- CODA: an open-source platform for federated analysis and machine learning on distributed healthcare data.Journal of the American Medical Informatics Association : JAMIA · 2024Article
- A scalable and transparent data pipeline for AI-enabled health data ecosystems.Frontiers in medicine · 2024Article
- Transforming Healthcare Analytics with FHIR: A Framework for Standardizing and Analyzing Clinical Data.Healthcare (Basel, Switzerland) · 2023Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundHealth data analytics is an area that is facing rapid change due to the acceleration of digitization of the health sector, and the changing landscape of health data and clinical terminology standards. Our research has identified a need for improved tooling to support analytics users in the task of analyzing Fast Healthcare Interoperability Resources (FHIR
resultsA server implementation was developed, featuring a FHIR API with new operations designed to support exploratory data analysis (EDA), advanced patient cohort selection and data preparation tasks. Integration with a FHIR Terminology Service is also supported, allowing users to incorporate knowledge from rich terminologies such as SNOMED CT within their queries. A prototype user interface for EDA was developed, along with visualizations in support of a health data analysis project.
conclusionsExperience with applying this technology within research projects and towards the development of analytics-enabled applications provides a preliminary indication that the FHIR Analytics API pattern implemented by Pathling is a valuable abstraction for data scientists and software developers within the health care domain. Pathling contributes towards the value proposition for the use of FHIR within health data analytics, and assists with the use of complex clinical terminologies in that context.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.