Evidence map›Paper›PMID 36076203›Full record

ArticleBMC veterinary research2022

Rapid detection of bovine rotavirus a by isothermal reverse transcription recombinase polymerase amplification assays.

Yuelin Liu, Libing Liu, Jinfeng Wang, Xiaoxia Sun, Yaxin Gao, Wanzhe Yuan, Jianchang Wang, Ruiwen Li

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yuelin LiuCollege of Veterinary Medicine, Hebei Agricultural University, No.2596 Lekai South Street, Baoding, Hebei, 071001, People's Republic of China.
Libing LiuTechnology Center of Shijiazhuang Customs District, No.318 Heping Xi Lu, Shijiazhuang, 050051, People's Republic of China.
Jinfeng WangTechnology Center of Shijiazhuang Customs District, No.318 Heping Xi Lu, Shijiazhuang, 050051, People's Republic of China.
Xiaoxia SunTechnology Center of Shijiazhuang Customs District, No.318 Heping Xi Lu, Shijiazhuang, 050051, People's Republic of China.
Yaxin GaoCollege of Veterinary Medicine, Hebei Agricultural University, No.2596 Lekai South Street, Baoding, Hebei, 071001, People's Republic of China.
Wanzhe YuanCollege of Veterinary Medicine, Hebei Agricultural University, No.2596 Lekai South Street, Baoding, Hebei, 071001, People's Republic of China.
Jianchang WangTechnology Center of Shijiazhuang Customs District, No.318 Heping Xi Lu, Shijiazhuang, 050051, People's Republic of China. jianchangwang1225@126.com.
Ruiwen LiCollege of Veterinary Medicine, Hebei Agricultural University, No.2596 Lekai South Street, Baoding, Hebei, 071001, People's Republic of China. liruiwen04@163.com.
Hebei Agricultural University · CN

Funding

Precision Animal Husbandry Discipline Group Construction Project of Hebei Agricultural University 1090064Project for Key Common Technologies for High Quality Agricultural Development of Hebei Province 19226636D
6 · The paper itself

Abstract

backgroundBovine rotavirus A (BRVA) is considered to be the most common pathogen of severe diarrhea in cattle worldwide, which could lead to the death of newborn calves and cause the significant economic losses to the cattle industry. As a novel isothermal nucleic acid amplification technique, recombinase polymerase amplification (RPA) has been applied widely for the rapid detection of different important pathogens in human and animals.

resultsAn RT-RPA assay based on the real time fluorescence monitoring (real-time RT-RPA) and an RT-RPA assay combined with a lateral flow strip (LFS RT-RPA) were successfully developed by targeting the VP6 gene of BRVA. The RT-RPA assays allowed the exponential amplification of the target fragment in 20 min. After incubation of the LFS RT-RPA on a metal bath at 40 °C, the results were displayed on the lateral flow strip within 5 min, while real-time RT-RPA allowed the real-time observation of the results in Genie III at 42 °C. Both of the two assays showed high specificity for BRVA without any cross-reaction with the other tested pathogens causing diarrhea in cattle. With the standard RNA of BRVA serving as a template, the limit of detection for real-time RT-RPA and LFS RT-RPA were 1.4 × 10

conclusionsIn this study, BRVA was successfully detected in cattle fecal samples by the developed real-time RT-RPA and LFS RT-RPA assays. The developed RT-RPA assays had great potential for the rapid detection of BRVA in under-equipped diagnostic laboratory and the point-of-need diagnosis at quarantine stations and farms, which is of great importance to control BRVA-associated diarrhea in cattle herds.

Indexed as

Reverse TranscriptionRotavirusAnimalsCattleDiarrheaHumansNucleic Acid Amplification TechniquesReal-Time Polymerase Chain ReactionRecombinasesSensitivity and SpecificityRecombinasesBRVAIsothermal amplificationLFS RT-RPAReal-time RT-RPAVP6 gene

Identifiers

PMID36076203
PMCPMC9453720
OpenAlexW4295084521

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.