Evidence map›Paper›PMID 36075138›Full record

ReviewCurrent opinion in genetics & development2022

High-throughput approaches to functional characterization of genetic variation in yeast.

Chiann-Ling C Yeh, Pengyao Jiang, Maitreya J Dunham

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Chiann-Ling C YehDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Pengyao JiangDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Maitreya J DunhamDepartment of Genome Sciences, University of Washington, Seattle, WA, USA. Electronic address: maitreya@uw.edu.
University of Washington · US

Funding

Comparative Functional Genomics of YeastR01HG010378 · NHGRI · STANFORD UNIVERSITY · PI DUNHAM, MAITREYA J, SHERLOCK, GAVIN J · 2019 to 2022
$2.3M
Genetic basis of stress tolerance in natural populations of yeastR01GM101091 · NIGMS · UNIVERSITY OF WASHINGTON · PI DUNHAM, MAITREYA J, HESS, DAVID CHARLES · 2012 to 2020
$2.0M
NHGRI NIH HHS R01 HG010378NIGMS NIH HHS R01 GM101091
6 · The paper itself

Abstract

Expansion of sequencing efforts to include thousands of genomes is providing a fundamental resource for determining the genetic diversity that exists in a population. Now, high-throughput approaches are necessary to begin to understand the role these genotypic changes play in affecting phenotypic variation. Saccharomyces cerevisiae maintains its position as an excellent model system to determine the function of unknown variants with its exceptional genetic diversity, phenotypic diversity, and reliable genetic manipulation tools. Here, we review strategies and techniques developed in yeast that scale classic approaches of assessing variant function. These approaches improve our ability to better map quantitative trait loci at a higher resolution, even for rare variants, and are already providing greater insight into the role that different types of mutations play in phenotypic variation and evolution not just in yeast but across taxa.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromosome MappingGenetic VariationPhenotypeQuantitative Trait LociSaccharomyces cerevisiae Proteins

Identifiers

PMID36075138
PMCPMC12551443
OpenAlexW4294622178

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.