Evidence map›Paper›PMID 36073815›Full record

ArticlemBio2022

Evolution of the Gut Microbiome in HIV-Exposed Uninfected and Unexposed Infants during the First Year of Life.

Conner L Jackson, Daniel N Frank, Charles E Robertson, Diana Ir, Jennifer M Kofonow, Mahlodi P Montlha, Eleonora A M L Mutsaerts, Marta C Nunes, Shabir A Madhi, Debashis Ghosh and 1 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  7. Gut microbiota of sub-Saharan Africa infants exposed to antiretroviral therapy: Scoping review.African journal of primary health care & family medicine · 2025
    Article
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  16. Host microbiome-pathogen interactions in pediatric infections.Current opinion in infectious diseases · 2023
    Review
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Conner L JacksonDepartment of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Daniel N FrankDepartment of Medicine, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Charles E RobertsonDepartment of Medicine, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Diana IrDepartment of Medicine, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Jennifer M KofonowDepartment of Medicine, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Mahlodi P MontlhaSouth African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit and Department of Science and Technology/National Research Foundation South African Research Chair Initiative in Vaccine Preventable Diseases, Faculty of Health Sciences, University of the Witwatersrandgrid.11951.3d, Johannesburg, South Africa.
Eleonora A M L MutsaertsSouth African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit and Department of Science and Technology/National Research Foundation South African Research Chair Initiative in Vaccine Preventable Diseases, Faculty of Health Sciences, University of the Witwatersrandgrid.11951.3d, Johannesburg, South Africa.
Marta C NunesSouth African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit and Department of Science and Technology/National Research Foundation South African Research Chair Initiative in Vaccine Preventable Diseases, Faculty of Health Sciences, University of the Witwatersrandgrid.11951.3d, Johannesburg, South Africa.
Shabir A MadhiSouth African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit and Department of Science and Technology/National Research Foundation South African Research Chair Initiative in Vaccine Preventable Diseases, Faculty of Health Sciences, University of the Witwatersrandgrid.11951.3d, Johannesburg, South Africa.
Debashis GhoshDepartment of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.
Adriana WeinbergDepartment of Medicine, University of Colorado Anschutz Medical Campusgrid.430503.1, Aurora, Colorado, USA.ORCID 0000-0001-6920-0623
University of Colorado Anschutz Medical Campus · USSouth African Medical Research Council · ZAColorado School of Public Health · US

Funding

Tregs, Gut Microbiome and Immune Responses in HIV-Exposed and Unexposed InfantsU01AI131360 · NIAID · UNIVERSITY OF COLORADO DENVER · PI MADHI, SHABIR A, WEINBERG, ADRIANA · 2017 to 2021
$2.2M
Relationship between maternal and fetal immune responsesR01HD107793 · NICHD · UNIVERSITY OF COLORADO DENVER · PI WEINBERG, ADRIANA · 2022 to 2024
$1.5M
NIAID NIH HHS U01 AI131360NICHD NIH HHS R01 HD107793
6 · The paper itself

Abstract

HIV-exposed uninfected infants (HEU) have abnormal immunologic functions and increased infectious morbidity in the first 6 months of life, which gradually decreases thereafter. The mechanisms underlying HEU immune dysfunctions are unknown. We hypothesized that unique characteristics of the HEU gut microbiota associated with maternal HIV status may underlie the HEU immunologic dysfunctions. We characterized the infant gut, maternal gut, and breast milk microbiomes of mother-infant pairs, including 123 with HEU and 117 with HIV-uninfected infants (HUU), from South Africa. Pan-bacterial 16S rRNA gene sequencing was performed on (i) infant stool at 6, 28, and 62 weeks; (ii) maternal stool at delivery and 62 weeks; and (iii) breast milk at 6 weeks. Infant gut alpha and beta diversities were similar between groups. Microbial composition significantly differed, including 12 genera, 5 families and 1 phylum at 6 weeks; 12 genera and 2 families at 28 weeks; and 2 genera and 2 families at 62 weeks of life. Maternal gut microbiomes significantly differed in beta diversity and microbial composition, and breast milk microbiomes differed in microbial composition only. Infant gut microbiotas extensively overlapped with maternal gut and minimally with breast milk microbiotas. Nevertheless, exclusively breastfed HEU and HUU had less divergent microbiomes than nonexclusively breastfed infants. Feeding pattern and maternal gut microbiome imprint the HEU gut microbiome. Compared to HUU, the HEU gut microbiome prominently differs in early infancy, including increased abundance of taxa previously observed to be present in excess in adults with HIV. The HEU and HUU gut microbiome compositions converge over time, mirroring the kinetics of HEU infectious morbidity risk.

Indexed as

Gastrointestinal MicrobiomeHIV InfectionsAdultBreast FeedingChild, PreschoolFemaleHumansInfantMilk, HumanRNA, Ribosomal, 16SRNA, Ribosomal, 16Sbreast milk microbiomegut microbiomeHIVHIV-exposed uninfected infantshuman immunodeficiency viruspregnant women with HIV

Identifiers

PMID36073815
PMCPMC9600264
OpenAlexW4294992456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.