Evidence map›Paper›PMID 36072953›Full record

ArticleFrontiers in medicine2022

ReDisX, a machine learning approach, rationalizes rheumatoid arthritis and coronary artery disease patients uniquely upon identifying subpopulation differentiation markers from their genomic data.

Hiu F Yip, Debajyoti Chowdhury, Kexin Wang, Yujie Liu, Yao Gao, Liang Lan, Chaochao Zheng, Daogang Guan, Kei F Lam, Hailong Zhu and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Hiu F YipComputational Medicine Laboratory, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Debajyoti ChowdhuryComputational Medicine Laboratory, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Kexin WangNational Key Clinical Specialty, Engineering Technology Research Center of Education Ministry of China, Guangzhou, China.
Yujie LiuDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China.
Yao GaoDepartment of Psychiatry, First Hospital, First Clinical Medical College of Shanxi Medical University, Taiyuan, China.
Liang LanDepartment of Communication Studies, School of Communication, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Chaochao ZhengDepartment of Mathematics, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Daogang GuanDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China.
Kei F LamDepartment of Mathematics, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Hailong ZhuComputational Medicine Laboratory, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Xuecheng TaiDepartment of Mathematics, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Aiping LuComputational Medicine Laboratory, Hong Kong Baptist University, Hong Kong, Hong Kong SAR, China.
Hong Kong Baptist University · HKSouthern Medical University · CNShanxi Medical University · CNZhujiang Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diseases originate at the molecular-genetic layer, manifest through altered biochemical homeostasis, and develop symptoms later. Hence, symptomatic diagnosis is inadequate to explain the underlying molecular-genetic abnormality and individual genomic disparities. The current trends include molecular-genetic information relying on algorithms to recognize the disease subtypes through gene expressions. Despite their disposition toward disease-specific heterogeneity and cross-disease homogeneity, a gap still exists in describing the extent of homogeneity within the heterogeneous subpopulation of different diseases. They are limited to obtaining the holistic sense of the whole genome-based diagnosis resulting in inaccurate diagnosis and subsequent management. Addressing those ambiguities, our proposed framework, ReDisX, introduces a unique classification system for the patients based on their genomic signatures. In this study, it is a scalable machine learning algorithm deployed to re-categorize the patients with rheumatoid arthritis and coronary artery disease. It reveals heterogeneous subpopulations within a disease and homogenous subpopulations across different diseases. Besides, it identifies

Indexed as

continuous max flowdrug repurposinggenomic signaturemachine learningprecision medicineredefined diagnosisReDisX

Identifiers

PMID36072953
PMCPMC9441882
OpenAlexW4292576000

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.