Evidence map›Paper›PMID 36072669›Full record

ArticleFrontiers in genetics2022

Comprehensive analysis for clarifying transcriptomics landscapes of spread through air spaces in lung adenocarcinoma.

Yuan Zeng, Lingli Zhou, Dexin Jia, Bo Pan, Xiaomei Li, Yan Yu

Abstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuan ZengDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin, China.
Lingli ZhouDepartment of Respiratory Medicine, Suizhou Hospital, Hubei University of Medicine, Hubei, China.
Dexin JiaDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin, China.
Bo PanDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin, China.
Xiaomei LiDepartment of Pathology, Harbin Medical University Cancer Hospital, Harbin, China.
Yan YuDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients with spread through air spaces (STAS) have worse postoperative survival and a higher recurrence rate in lung adenocarcinoma, even in the earliest phases of the disease. At present, the molecular pathogenesis of STAS is not well understood. Therefore, to illustrate the underlying pathogenic mechanism of STAS, we accomplished a comprehensive analysis of a microarray dataset of STAS. Differential expression analysis revealed 841 differentially expressed genes (DEGs) between STAS_positive and STAS_negative groups. Additionally, we acquired two hub genes associated with survival. Gene set variation analysis (GSVA) confirmed that the main differential signaling pathways between the two groups were hypoxia VHL targets, PKC, and pyrimidine metabolism pathways. Analysis of immune activity showed that the increased expression of MHC-class-Ⅰ was observed in the STAS_positive group. These findings provided novel insights for a better knowledge of pathogenic mechanisms and potential therapeutic markers for STAS treatment.

Indexed as

differential expression analysisenrichment analysislung adenocarcinomaprotein–protein interactionRNA-seqspread through air spaces

Identifiers

PMID36072669
PMCPMC9441605

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.