Evidence map›Paper›PMID 36071801›Full record

ArticleIUCrJ2022

A general method for directly phasing diffraction data from high-solvent-content protein crystals.

Richard Lawrence Kingston, Rick P Millane

Abstract read
In one paragraph

Article in IUCrJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Analysis of crystallographic phase retrieval using iterative projection algorithms.Acta crystallographica. Section D, Structural biology · 2024
    Article
  5. Deep-learning map segmentation for protein X-ray crystallographic structure determination.Acta crystallographica. Section D, Structural biology · 2024
    Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Richard Lawrence KingstonSchool of Biological Sciences, University of Auckland, 3a Symonds St, Auckland City, Auckland 1010, New Zealand.ORCID https://orcid.org/0000-0003-0893-6973
Rick P MillaneComputational Imaging Group, Department of Electrical and Computer Engineering, University of Canterbury, Christchurch, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A procedure is described for direct phase determination in protein crystallography, applicable to crystals with high solvent content. The procedure requires only the diffraction data and an estimate of the solvent content as input. Direct phase determination is treated as a constraint satisfaction problem, in which an image is sought that is consistent with both the diffraction data and generic constraints on the density distribution in the crystal. The problem is solved using an iterative projection algorithm, the

Indexed as

high-solvent-content crystalsimagingphasingprotein crystalssolvent flatnessstructure determinationX-ray crystallography

Identifiers

PMID36071801
PMCPMC9438493

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.