Evidence map›Paper›PMID 36071059›Full record

ArticleNature communications2022

Circuit analysis reveals a neural pathway for light avoidance in Drosophila larvae.

Altar Sorkaç, Yiannis A Savva, Doruk Savaş, Mustafa Talay, Gilad Barnea

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Timed receptor tyrosine kinase signaling couples the central and a peripheral circadian clock inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Altar Sorkaç *Department of Neuroscience, Brown University, Providence, RI, 02912, USA.ORCID 0000-0002-0739-6314
Yiannis A Savva *Department of Neuroscience, Brown University, Providence, RI, 02912, USA.
Doruk Savaş *Department of Neuroscience, Brown University, Providence, RI, 02912, USA.ORCID 0000-0003-4282-1571
Mustafa TalayDepartment of Neuroscience, Brown University, Providence, RI, 02912, USA.ORCID 0000-0002-9046-1366
Gilad BarneaDepartment of Neuroscience, Brown University, Providence, RI, 02912, USA. gilad_barnea@brown.edu.ORCID 0000-0001-6842-3454
Allen Institute for Brain Science · US

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
The neural circuits underlying gustatory perception in fliesR01DC017146 · NIDCD · BROWN UNIVERSITY · PI BARNEA, GILAD · 2018 to 2022
$2.0M
Functional mapping of mammalian neural circuitsR01MH105368 · NIMH · BROWN UNIVERSITY · PI BARNEA, GILAD · 2014 to 2017
$1.3M
Trans-synaptic tracing and manipulation of olfactory circuits in fliesR21DC014333 · NIDCD · BROWN UNIVERSITY · PI BARNEA, GILAD · 2015 to 2016
$447k
NIDCD NIH HHS R01 DC017146NIDCD NIH HHS R21 DC014333NIH HHS P40 OD018537NIMH NIH HHS R01 MH105368
6 · The paper itself

Abstract

Understanding how neural circuits underlie behaviour is challenging even in the connectome era because it requires a combination of anatomical and functional analyses. This is exemplified in the circuit underlying the light avoidance behaviour displayed by Drosophila melanogaster larvae. While this behaviour is robust and the nervous system relatively simple, the circuit is only partially delineated with some contradictions among studies. Here, we devise trans-Tango MkII, an offshoot of the transsynaptic circuit tracing tool trans-Tango, and implement it in anatomical tracing together with functional analysis. We use neuronal inhibition to test necessity of particular neuronal types in light avoidance and selective neuronal activation to examine sufficiency in rescuing light avoidance deficiencies exhibited by photoreceptor mutants. Our studies reveal a four-order circuit for light avoidance connecting the light-detecting photoreceptors with a pair of neuroendocrine cells via two types of clock neurons. This approach can be readily expanded to studying other circuits.

Indexed as

ConnectomeDrosophilaAnimalsDrosophila melanogasterLarvaNeural Pathways

Identifiers

PMID36071059
PMCPMC9452580
OpenAlexW4294891844

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.