ArticlePlant biotechnology journal2022
A spatiotemporal transcriptomic network dynamically modulates stalk development in maize.
Article in Plant biotechnology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Integrating high-throughput phenomics and GWAS unravels the HaCBF4-Horticulture research · 2026Article
- A Novel Mutation in Maize D1 (Dwarf 1) Confers a Severe Dwarf Phenotype.Current issues in molecular biology · 2026Article
- Article
- Decades' progress and prospects on maize functional genomics and molecular breeding.Science China. Life sciences · 2025Review
- A multi-parent population approach to reveal the genetic basis of plant height in maize.BMC plant biology · 2025Article
- Transcriptome and co-expression network analysis reveal the genetic basis of cell wall components in maize stalks.BMC genomics · 2025Article
- Shoot elongation patterns and regulatory genes controlling grapevine (Vitis vinifera L.) internode elongation.Plant molecular biology · 2025Article
- Association analysis of maize stem vascular bundle micro-characteristics with yield components based on micro-CT and identification of related genes.Scientific reports · 2025Article
- The Identification of a Single-Base Mutation in the MaizePlants (Basel, Switzerland) · 2025Article
- A special short-wing petal faba genome and genetic dissection of floral and yield-related traits accelerate breeding and improvement of faba bean.Genome biology · 2025Article
- Comparative transcriptome analysis reveals potential regulatory genes involved in the development and strength formation of maize stalks.BMC plant biology · 2025Article
- Polymerization of beneficial plant height QTLs to develop superior lines which can achieving hybrid performance levels.Molecular breeding : new strategies in plant improvement · 2025Article
- Maize-Tripsacum-Teosinte allopolyploid (MTP), a novel dwarf mutant inducer tool in maize.Plant biotechnology journal · 2025Article
- GA3-InducedPlants (Basel, Switzerland) · 2024Article
- A Spatiotemporal Transcriptome Reveals Stalk Development in Pearl Millet.International journal of molecular sciences · 2024Article
- Plant microphenotype: from innovative imaging to computational analysis.Plant biotechnology journal · 2024Review
- QTL mapping for plant height and ear height using bi-parental immortalized heterozygous populations in maize.Frontiers in plant science · 2024Article
- Integration of high-throughput phenotyping, GWAS, and predictive models reveals the genetic architecture of plant height in maize.Molecular plant · 2023Article
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10 authors.
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Abstract
Maize (Zea mays) is an important cereal crop with suitable stalk formation which is beneficial for acquiring an ideal agronomic trait to resist lodging and higher planting density. The elongation pattern of stalks arises from the variable growth of individual internodes driven by cell division and cell expansion comprising the maize stalk. However, the spatiotemporal dynamics and regulatory network of the maize stalk development and differentiation process remain unclear. Here, we report spatiotemporally resolved transcriptomes using all internodes of the whole stalks from developing maize at the elongation and maturation stages. We identified four distinct groups corresponding to four developmental zones and nine specific clusters with diverse spatiotemporal expression patterns among individual internodes of the stalk. Through weighted gene coexpression network analysis, we constructed transcriptional regulatory networks at a fine spatiotemporal resolution and uncovered key modules and candidate genes involved in internode maintenance, elongation, and division that determine stalk length and thickness in maize. Further CRISPR/Cas9-mediated knockout validated the function of a cytochrome P450 gene, ZmD1, in the regulation of stalk length and thickness as predicted by the WGCN. Collectively, these results provide insights into the high genetic complexity of stalk development and the potentially valuable resources with ideal stalk lengths and widths for genetic improvements in maize.
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