Evidence map›Paper›PMID 36067229›Full record

ArticlePLoS biology2022

M-TUBE enables large-volume bacterial gene delivery using a high-throughput microfluidic electroporation platform.

Po-Hsun Huang, Sijie Chen, Anthony L Shiver, Rebecca Neal Culver, Kerwyn Casey Huang, Cullen R Buie

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. An Engineered Variant ofACS synthetic biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Po-Hsun HuangDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Sijie ChenDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Anthony L ShiverDepartment of Bioengineering, Stanford University, Stanford, California, United States of America.
Rebecca Neal CulverDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Kerwyn Casey HuangDepartment of Bioengineering, Stanford University, Stanford, California, United States of America.ORCID 0000-0002-8043-8138
Cullen R BuieDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.ORCID 0000-0002-2275-4570
Massachusetts Institute of Technology · USStanford University · USChan Zuckerberg Initiative (United States) · US

Funding

A universal pipeline for functional characterization of the human microbiota at a massive scaleRM1GM135102 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BUIE, CULLEN RICHARD, DEUTSCHBAUER, ADAM M · 2020 to 2024
$7.6M
NIGMS NIH HHS RM1 GM135102
6 · The paper itself

Abstract

Conventional cuvette-based and microfluidics-based electroporation approaches for bacterial gene delivery have distinct advantages, but they are typically limited to relatively small sample volumes, reducing their utility for applications requiring high throughput such as the generation of mutant libraries. Here, we present a scalable, large-scale bacterial gene delivery approach enabled by a disposable, user-friendly microfluidic electroporation device requiring minimal device fabrication and straightforward operation. We demonstrate that the proposed device can outperform conventional cuvettes in a range of situations, including across Escherichia coli strains with a range of electroporation efficiencies, and we use its large-volume bacterial electroporation capability to generate a library of transposon mutants in the anaerobic gut commensal Bifidobacterium longum.

Indexed as

Genes, BacterialGene Transfer TechniquesMicrofluidicsBifidobacterium longumElectroporationEscherichia coliTransformation, Bacterial

Identifiers

PMID36067229
PMCPMC9481174
OpenAlexW4294798300

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.