Evidence map›Paper›PMID 36066883›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2023

Comparative Microbiomics Analysis of Antimicrobial Antibody Response between Patients with Lung Cancer and Control Subjects with Benign Pulmonary Nodules.

Mahasish Shome, Weimin Gao, Anna Engelbrektson, Lusheng Song, Stacy Williams, Vel Murugan, Jin G Park, Yunro Chung, Joshua LaBaer, Ji Qiu

Open access · greenAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Mahasish ShomeBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-0257-6922
Weimin GaoBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-6758-9775
Anna EngelbrektsonBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-7923-9449
Lusheng SongBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0003-2534-5198
Stacy WilliamsBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-0328-6548
Vel MuruganBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-7368-7742
Jin G ParkBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0001-6481-9590
Yunro ChungBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0001-9125-9277
Joshua LaBaerBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0001-5788-9697
Ji QiuBiodesign Institute, Arizona State University, Tempe, Arizona.ORCID 0000-0002-7913-9042
Arizona State University · US

Funding

High-throughput immunoproteomics for cancer biomarker discoveryU2CCA271903 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI JOSHUA LABAER · 2022 to 2026
$5.3M
Novel approaches to study immune responses to post translational modifications for cancer detectionU01CA214201 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI ANDERSON, KAREN SUE, LABAER, JOSHUA · 2016 to 2021
$2.6M
Exploiting the immune response to detect pathogen-induced cancersR01CA199948 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LABAER, JOSHUA, QIU, JI · 2015 to 2019
$2.4M
NCI NIH HHS R01 CA199948NCI NIH HHS U01 CA214201NCI NIH HHS U2C CA271903
6 · The paper itself

Abstract

backgroundCT screening can detect lung cancer early but suffers a high false-positive rate. There is a need for molecular biomarkers that can distinguish malignant and benign indeterminate pulmonary nodules (IPN) detected by CT scan.

methodsWe profiled antibodies against 901 individual microbial antigens from 27 bacteria and 29 viruses in sera from 127 lung adenocarcinoma (ADC), 123 smoker controls (SMC), 170 benign nodule controls (BNC) individuals using protein microarrays to identify ADC and BNC specific antimicrobial antibodies.

resultsAnalyzing fourth quartile ORs, we found more antibodies with higher prevalence in the three BNC subgroups than in ADC or SMC. We demonstrated that significantly more anti-Helicobacter pylori antibodies showed higher prevalence in ADC relative to SMC. We performed subgroup analysis and found that more antibodies with higher prevalence in light smokers (≤20 pack-years) compared with heavy smokers (>20 pack-years), in BNC with nodule size >1 cm than in those with ≤1 cm nodules, and in stage I ADC than in stage II and III ADC. We performed multivariate analysis and constructed antibody panels that can distinguish ADC versus SMC and ADC versus BNC with area under the ROC curve (AUC) of 0.88 and 0.80, respectively.

conclusionsAntimicrobial antibodies have the potential to reduce the false positive rate of CT screening and provide interesting insight in lung cancer development. IMPACT: Microbial infection plays an important role in lung cancer development and the formation of benign pulmonary nodules.

Indexed as

Adenocarcinoma of LungAnti-Infective AgentsLung NeoplasmsMultiple Pulmonary NodulesAntibody FormationHumansAnti-Infective Agents

Identifiers

PMID36066883
PMCPMC10494706
OpenAlexW4294770538

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.