Evidence map›Paper›PMID 36066773›Full record

ArticlePlanta2022

Functional characterization of the pUceS8.3 promoter and its potential use for ectopic gene overexpression.

Rodrigo Rocha Fragoso, Fabricio Barbosa Monteiro Arraes, Isabela Tristan Lourenço-Tessutti, Vívian Jesus Miranda, Marcos Fernando Basso, André Vinicius Júlio Ferreira, Antônio Américo Barbosa Viana, Camila Barrozo Jesus Lins, Philippe Castro Lins, Stéfanie Menezes Moura and 8 more

Abstract read
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Article in Planta, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Rodrigo Rocha FragosoEmbrapa Savannah, Planaltina, DF, Brazil.
Fabricio Barbosa Monteiro ArraesNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Isabela Tristan Lourenço-TessuttiNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Vívian Jesus MirandaEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Marcos Fernando BassoNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
André Vinicius Júlio FerreiraEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Antônio Américo Barbosa VianaEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Camila Barrozo Jesus LinsEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Philippe Castro LinsEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Stéfanie Menezes MouraEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
João Aguiar Nogueira BatistaEmbrapa Genetic Resources and Biotechnology, PqEB Final Av. W/5 Norte, Brasília DF, CEP 70.770-900, Brazil.
Maria Cristina Mattar SilvaNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Gilbert EnglerNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Carolina Vianna MorganteNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Maria Eugênia Lisei-de-SaNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Raquel Medeiros VasquesNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Janice de Almeida-EnglerNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil.
Maria Fatima Grossi-de-SaNational Institute of Science and Technology, INCT PlantStress Biotech, Embrapa, Brazil. fatima.grossi@embrapa.br.ORCID http://orcid.org/0000-0001-8184-9599
Brazilian Agricultural Research Corporation · BRCentre National de la Recherche Scientifique · FRUniversidade Federal de Minas Gerais · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThe pUceS8.3 is a constitutive gene promoter with potential for ectopic and strong genes overexpression or active biomolecules in plant tissues attacked by pests, including nematode-induced giant cells or galls. Soybean (Glycine max) is one of the most important agricultural commodities worldwide and a major protein and oil source. Herein, we identified the soybean ubiquitin-conjugating (E2) enzyme gene (GmUBC4; Glyma.18G216000), which is significantly upregulated in response to Anticarsia gemmatalis attack and Meloidogyne incognita-induced galls during plant parasitism by plant nematode. The GmUBC4 promoter sequence and its different modules were functionally characterized in silico and in planta using transgenic Arabidopsis thaliana and G. max lines. Its full-length transcriptional regulatory region (promoter and 5´-UTR sequences, named pUceS8.3 promoter) was able to drive higher levels of uidA (β-glucuronidase) gene expression in different tissues of transgenic A. thaliana lines compared to its three shortened modules and the p35SdAMV promoter. Notably, higher β-glucuronidase (GUS) enzymatic activity was shown in M. incognita-induced giant cells when the full pUceS8.3 promoter drove the expression of this reporter gene. Furthermore, nematode-specific dsRNA molecules were successfully overexpressed under the control of the pUceS8.3 promoter in transgenic soybean lines. The RNAi gene construct used here was designed to post-transcriptionally downregulate the previously characterized pre-mRNA splicing factor genes from Heterodera glycines and M. incognita. A total of six transgenic soybean lines containing RNAi gene construct were selected for molecular characterization after infection with M. incognita pre-parasitic second-stage (ppJ2) nematodes. A strong reduction in the egg number produced by M. incognita after parasitism was observed in those transgenic soybean lines, ranging from 71 to 92% compared to wild-type control plants. The present data demonstrated that pUceS8.3 is a gene promoter capable of effectively driving dsRNA overexpression in nematode-induced giant cells of transgenic soybean lines and can be successfully applied as an important biotechnological asset to generate transgenic crops with improved resistance to root-knot nematodes as well as other pests.

Indexed as

ArabidopsisTylenchoideaAnimalsGlucuronidaseGlycine maxPlants, Genetically ModifiedRNA, Double-StrandedGlucuronidaseRNA, Double-StrandedAnticarsia gemmatalisGlycine maxGmUBC4 promoter/geneMeloidogyne incognitaRNA interferenceUbiquitin-conjugating (E2) enzyme gene promoter

Identifiers

PMID36066773
OpenAlexW4294751377

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.