Evidence map›Paper›PMID 36064972›Full record

ArticleNature chemistry2022

Genome-based discovery and total synthesis of janustatins, potent cytotoxins from a plant-associated bacterium.

Reiko Ueoka, Philipp Sondermann, Stefan Leopold-Messer, Yizhou Liu, Rei Suo, Agneya Bhushan, Lida Vadakumchery, Ute Greczmiel, Yoko Yashiroda, Hiromi Kimura and 8 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 3 countries.

Reiko Ueoka *Institute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.
Philipp Sondermann *Laboratory of Organic Chemistry, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.
Stefan Leopold-Messer *Institute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.ORCID 0000-0003-3490-3550
Yizhou LiuNMR Structure Elucidation, Process & Analytical Chemistry, Merck & Co. Inc., Rahway, NJ, USA.
Rei SuoLaboratory of Aquatic Natural Products Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Agneya BhushanInstitute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.
Lida VadakumcheryInstitute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.ORCID 0000-0002-8780-5391
Ute GreczmielInstitute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.
Yoko YashirodaMolecular Ligand Target Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Hiromi KimuraMolecular Ligand Target Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Shinichi NishimuraMolecular Ligand Target Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.ORCID 0000-0002-5998-3780
Yojiro HoshikawaDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan.
Minoru YoshidaMolecular Ligand Target Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.ORCID 0000-0002-4376-5674
Annette OxeniusInstitute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland.
Shigeki MatsunagaLaboratory of Aquatic Natural Products Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
R Thomas WilliamsonNMR Structure Elucidation, Process & Analytical Chemistry, Merck & Co. Inc., Rahway, NJ, USA.
Erick M CarreiraLaboratory of Organic Chemistry, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland. erickm.carreira@org.chem.ethz.ch.ORCID 0000-0003-1472-490X
Jörn PielInstitute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Zurich, Switzerland. jpiel@etz.ch.ORCID 0000-0002-2282-8154
Board of the Swiss Federal Institutes of Technology · CHRIKEN Center for Sustainable Resource Science · JPMerck & Co., Inc., Rahway, NJ, USA (United States) · USThe University of Tokyo · JPNihon University · JPScripps Research Institute · US

Funding

European Research Council 742739Swiss National Science Foundation 167051
6 · The paper itself

Abstract

Host-associated bacteria are increasingly being recognized as underexplored sources of bioactive natural products with unprecedented chemical scaffolds. A recently identified example is the plant-root-associated marine bacterium Gynuella sunshinyii of the chemically underexplored order Oceanospirillales. Its genome contains at least 22 biosynthetic gene clusters, suggesting a rich and mostly uncharacterized specialized metabolism. Here, in silico chemical prediction of a non-canonical polyketide synthase cluster has led to the discovery of janustatins, structurally unprecedented polyketide alkaloids with potent cytotoxicity that are produced in minute quantities. A combination of MS and two-dimensional NMR experiments, density functional theory calculations of

Indexed as

Biological ProductsPolyketidesBacteriaCytotoxinsPolyketide SynthasesBiological ProductsCytotoxinsPolyketidesPolyketide Synthases

Identifiers

PMID36064972
PMCPMC7613652
OpenAlexW4294636985

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.