Evidence map›Paper›PMID 36064865›Full record

ArticleScientific reports2022

Complete chloroplast genome sequence of Lens ervoides and comparison to Lens culinaris.

Nurbanu Tayşi, Yasin Kaymaz, Duygu Ateş, Hatice Sari, Cengiz Toker, M Bahattin Tanyolaç

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Comparative chloroplast genome analysis of fourFrontiers in plant science · 2026
    Article
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  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nurbanu TayşiBioengineering Department, Faculty of Engineering, Ege University, Izmir, Turkey.
Yasin KaymazBioengineering Department, Faculty of Engineering, Ege University, Izmir, Turkey.
Duygu AteşBioengineering Department, Faculty of Engineering, Ege University, Izmir, Turkey.
Hatice SariDepartment of Field Crops, Faculty of Agriculture, Akdeniz University, Antalya, Turkey.
Cengiz TokerDepartment of Field Crops, Faculty of Agriculture, Akdeniz University, Antalya, Turkey.
M Bahattin TanyolaçBioengineering Department, Faculty of Engineering, Ege University, Izmir, Turkey. bahattin.tanyolac@ege.edu.tr.
Ege University · TRAkdeniz University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lens is a member of the Papilionoideae subfamily of Fabaceae and is generally used as a source of vegetable protein as part of human diets in many regions worldwide. Chloroplast (cp) genomes are highly active genetic components of plants and can be utilized as molecular markers for various purposes. As one of the wild lentil species, the Lens ervoides cp genome has been sequenced for the first time in this study using next-generation sequencing. The de novo assembly of the cp genome resulted in a single 122,722 bp sequence as two separate coexisting structural haplotypes with similar lengths. Results indicated that the cp genome of L. ervoides belongs to the inverted repeat lacking clade. Several noteworthy divergences within the coding regions were observed in ndhB, ndhF, rbcL, rpoC2, and ycf2 genes. Analysis of relative synonymous codon usage showed that certain genes, psbN, psaI, psbI, psbE, psbK, petD, and ndhC, preferred using biased codons more often and therefore might have elevated expression and translation efficiencies. Overall, this study exhibited the divergence level between the wild-type and cultured lentil cp genomes and pointed to certain regions that can be utilized as distinction markers for various goals.

Indexed as

Genome, ChloroplastLens PlantCodonHumansOpen Reading FramesPhylogenyCodon

Identifiers

PMID36064865
PMCPMC9445179
OpenAlexW4294613012

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.