Evidence map›Paper›PMID 36064847›Full record

ArticleNPJ genomic medicine2022

Huntington's disease age at motor onset is modified by the tandem hexamer repeat in TCERG1.

Sergey V Lobanov, Branduff McAllister, Mia McDade-Kumar, G Bernhard Landwehrmeyer, Michael Orth, Anne E Rosser, REGISTRY Investigators of the European Huntington’s disease network, Jane S Paulsen, PREDICT-HD Investigators of the Huntington Study Group, Jong-Min Lee and 8 more

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 4 countries.

Sergey V LobanovMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-3126-1903
Branduff McAllisterMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.
Mia McDade-KumarMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-8923-6401
G Bernhard LandwehrmeyerDepartment of Neurology, University of Ulm, Ulm, Germany.
Michael OrthDepartment of Old Age Psychiatry and Psychotherapy, Bern University, Bern, Switzerland.
Anne E RosserMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.
REGISTRY Investigators of the European Huntington’s disease network
Jane S PaulsenDepartment of Neurology, University of Wisconsin, Madison, WI53705, USA.
PREDICT-HD Investigators of the Huntington Study Group
Jong-Min LeeMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, 02114, USA.
Marcy E MacDonaldMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, 02114, USA.
James F GusellaMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, 02114, USA.
Jeffrey D LongDepartments of Psychiatry and Biostatistics, University of Iowa, Iowa City, IA, USA.ORCID http://orcid.org/0000-0001-7181-9652
Mina RytenGreat Ormond Street Institute of Child Health, Genetics and Genomic Medicine, University, College London, London, UK.
Nigel M WilliamsMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.
Peter HolmansMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.
Thomas H MasseyMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK. MasseyT1@cardiff.ac.uk.ORCID http://orcid.org/0000-0002-9804-2131
Lesley JonesMedical Research Council Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-3007-4612
Broad Institute · USCardiff University · GBUK Dementia Research Institute · GBCardiff Council · GBGreat Ormond Street Hospital · GBUniversität Ulm · DEUniversity of Bern · CHUniversity of Iowa · USUniversity of Wisconsin–Madison · US

Funding

Disease-Modifying Genes in Huntington's DiseaseR01NS091161 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI JAMES F GUSELLA · 2015 to 2026
$7.2M
Therapeutic Potential of Base Editing Strategies to Convert CAG to CAA in Huntington's DiseaseR01NS119471 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI LEE, JONG-MIN · 2021 to 2025
$2.6M
Genetic foundation for complete mutant allele-specific CRISPR in neurodegenerative diseasesR01NS105709 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI LEE, JONG-MIN · 2018 to 2022
$2.4M
Alzheimer's Research UK (ARUK) ARUK-PPG2018A-015Brain Research Trust (BRT) 201617-06Medical Research Council MR/P001629/1NINDS NIH HHS R01 NS091161NINDS NIH HHS R01 NS105709NINDS NIH HHS R01 NS119471RCUK | Medical Research Council (MRC) MR/L010305/1Wellcome Trust
6 · The paper itself

Abstract

Huntington's disease is caused by an expanded CAG tract in HTT. The length of the CAG tract accounts for over half the variance in age at onset of disease, and is influenced by other genetic factors, mostly implicating the DNA maintenance machinery. We examined a single nucleotide variant, rs79727797, on chromosome 5 in the TCERG1 gene, previously reported to be associated with Huntington's disease and a quasi-tandem repeat (QTR) hexamer in exon 4 of TCERG1 with a central pure repeat. We developed a method for calling perfect and imperfect repeats from exome-sequencing data, and tested association between the QTR in TCERG1 and residual age at motor onset (after correcting for the effects of CAG length in the HTT gene) in 610 individuals with Huntington's disease via regression analysis. We found a significant association between age at onset and the sum of the repeat lengths from both alleles of the QTR (p = 2.1 × 10

Identifiers

PMID36064847
PMCPMC9445028
OpenAlexW4294678077

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.