Evidence map›Paper›PMID 36060855›Full record

ArticleThe Pan African medical journal2022

Performance of Xpert HIV-1 viral load test in Senegal: a country of high circulation of CRF02_AG.

Pauline Yacine Sène, Halimatou Diop-Ndiaye, Aissatou Sow Ndoye, Brianan Kiernan, Khadidiatou Coulibaly, Ousseynou Ndiaye, Sada Diallo, Anna Julienne Selbe Ndiaye, Mengue Fall, Adjiratou Aissatou Ba and 6 more

Abstract read
In one paragraph

Article in The Pan African medical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Pauline Yacine SèneLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Halimatou Diop-NdiayeLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Aissatou Sow NdoyeLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Brianan KiernanClinton Health Access Initiative, Dakar, Senegal.
Khadidiatou CoulibalyDivision de Lutte contre le SIDA/IST, Dakar, Sénégal.
Ousseynou NdiayeInstitut de Recherche en Santé, de Surveillance Epidémiologique et de Formation, Dakar, Sénégal.
Sada DialloLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Anna Julienne Selbe NdiayeLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Mengue FallLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Adjiratou Aissatou BaLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Makhtar CamaraLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Cheikh Saad Bouh BoyeLaboratoire de Bactériologie-Virologie CHU le Dantec, Université Cheikh Anta Diop de Dakar, Dakar, Sénégal.
Ndeye Fatou NgomUnited Nations International Children's Emergency Fund (UNICEF), Dakar, Sénégal.
Charlotte LejeuneClinton Health Access Initiative, Dakar, Senegal.
Cheikh Tidiane NdourDivision de Lutte contre le SIDA/IST, Dakar, Sénégal.
Coumba Toure KaneInstitut de Recherche en Santé, de Surveillance Epidémiologique et de Formation, Dakar, Sénégal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: the introduction of the point-of-care in HIV-1 viral load quantification appears to be a complementary strategy to the existing conventional system of the acceleration plan for the achievement of the three 90s in Senegal. The objective of this study was to evaluate the performance of the Xpert® HIV-1 viral load in the context of circulation of non-B, non-C subtypes. Methods: two hundred samples, were tested on Xpert® HIV-1 Viral Load using 1 ml of plasma in comparison to 600 μl on Abbott Real-time HIV-1 assay. The difference between viral load values was considered significant for Dlog <0.5 log copies/ml. Results: a good correlation (r=0.985) was noted and confirmed using passing-bablok regression (slope 1.048; 95% CI: 1.036 to 1.069) for 188 samples with samples. A mean difference of 0.0075 log10 copies/ml for a 95% confidence interval (CI) of 0.002 log10 copies/ml to 0.013 log10 copies/ml was obtained. Sensitivity and specificity were respectively 93.6% and 93.5% at the threshold of 1.6 log10 copies/ml and 100% and 99% at the threshold of 3.0 log10 copies/ml. Conclusion: these results show that Xpert® HIV-1 Viral Load has excellent performance. In Senegal, and can be used for HIV viral load monitoring.

Indexed as

HIV-1HIV InfectionsHumansRNA, ViralSenegalViral LoadRNA, ViralCRF02_AGHIV-1plasmapoint of care systemSenegalviral load

Identifiers

PMID36060855
PMCPMC9429987

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.