Evidence map›Paper›PMID 36060659›Full record

ArticleComputational and mathematical methods in medicine2022

LINC00887 Fosters Development of Clear Cell Renal Cell Carcinoma via Inhibiting CD8+ T Cell Immune Infiltration.

Jinfeng Wu, Rongcheng Lin, Lei Zhang, Yongbao Wei, Ruochen Zhang, Wanghai Cai, Weilie Hu

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Establishment of a Seven-Gene Signature Associated with CD8International journal of molecular sciences · 2023
    Trial
  2. Review
  3. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jinfeng WuThe First School of Clinical Medicine, Southern Medical University, China.ORCID https://orcid.org/0000-0002-7814-101X
Rongcheng LinDepartment of Urology, Shengli Clinical Medical College of Fujian Medical University, Fujian Provincial Hospital, China.ORCID https://orcid.org/0000-0003-0196-8569
Lei ZhangThe First School of Clinical Medicine, Southern Medical University, China.ORCID https://orcid.org/0000-0002-0596-1287
Yongbao WeiDepartment of Urology, Shengli Clinical Medical College of Fujian Medical University, Fujian Provincial Hospital, China.ORCID https://orcid.org/0000-0003-3019-710X
Ruochen ZhangDepartment of Urology, Shengli Clinical Medical College of Fujian Medical University, Fujian Provincial Hospital, China.ORCID https://orcid.org/0000-0003-4431-1620
Wanghai CaiDepartment of Urology, Shengli Clinical Medical College of Fujian Medical University, Fujian Provincial Hospital, China.ORCID https://orcid.org/0000-0002-1638-1560
Weilie HuThe First School of Clinical Medicine, Southern Medical University, China.ORCID https://orcid.org/0000-0001-6754-7965
Fujian Medical University · CNGuangdong Hydropower Planning & Design Institute · CNSouthern Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: lncRNAs affect adaptive and innate immunity of cancer via mediating functional states of immune cells, genes, and pathways. Nonetheless, little is known about the molecular mechanism of lncRNA-mediated CD8+ T cell immune infiltration in progression of clear cell renal cell carcinoma (ccRCC). We designed this work to investigate the role of LINC00887 in regulating CD8+ T cell immune infiltration in ccRCC. Methods: Correlation between LINC00887 and immune factors and the expression level of LINC00887 in ccRCC were analyzed by bioinformatics methods (TCGA-KIRC database, "edgeR" package, "clusterProfiler" package, and "CIBERSORT" package). LINC00887 expression in ccRCC was examined via RT-qPCR. The cytokilling capacity of CD8+ T cells was evaluated by the lactate dehydrogenase assay. The apoptotic ability of CD8+ T cells was measured by flow cytometry. The chemotactic ability of CD8+ T cells was revealed by chemotaxis assay. CXCR3, CXCL9, and CXCL10 levels were assessed by RT-qPCR. Results: As suggested by bioinformatics analysis, LINC00887 was markedly upregulated in ccRCC patients and associated with expression of immune-suppression molecule, thereby abating the immune infiltration level of CD8+ cells in tumor tissue. As revealed by cellular assay, LINC00887 was upregulated in ccRCC cells, and knockdown of LINC00887 resulted in a decreased PD-L1 expression, increased CD8+ T cell toxicity, decreased apoptotic levels, and enhanced chemotaxis. Moreover, we found that LINC00887 exhibited inhibitory effect on immune infiltration of CD8+ cells in clinical tissues. Conclusions: The results of this study suggested that LINC00887 promoted ccRCC progression by inhibiting immune infiltration of CD8+ T cells, providing new insights into pathogenesis of ccRCC and suggesting LINC00887 being a promising immunotherapy target for ccRCC.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsRNA, Long NoncodingCD8-Positive T-LymphocytesHumansImmunotherapyRNA, Long Noncoding

Identifiers

PMID36060659
PMCPMC9436564
OpenAlexW4293224342

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.