Evidence map›Paper›PMID 36056990›Full record

ArticleArchives of microbiology2022

Genotype and organ effect on the occupancy of phyllosphere prokaryotes in different rice landraces.

Freddy Kuok San Yeo, Yin Hui Cheok, Wan Nurainie Wan Ismail, Felicia Fui Kueh-Tai, Tommy Tsan-Yuk Lam, Yee Ling Chong

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Freddy Kuok San YeoFaculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300, Kota Samarahan, Sarawak, Malaysia. yksfreddy@unimas.my.ORCID http://orcid.org/0000-0003-0884-0920
Yin Hui CheokFaculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300, Kota Samarahan, Sarawak, Malaysia.
Wan Nurainie Wan IsmailFaculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300, Kota Samarahan, Sarawak, Malaysia.
Felicia Fui Kueh-TaiAgriculture Research Centre, Semongok, 12th Mile, Kuching-Serian Road, P.O. Box 977, 93720, Kuching, Sarawak, Malaysia.
Tommy Tsan-Yuk LamState Key Laboratory of Emerging Infectious Diseases, School of Public Health, Li Ka Shing, Faculty of Medicine, The University of Hong Kong, 21 Sassoon Road, Pokfulam, Hong Kong SAR, China.
Yee Ling ChongDepartment of Science and Environmental Studies, Faculty of Liberal Arts and Social Sciences, The Education University of Hong Kong, 10 Lo Ping Road, Ting Kok, Hong Kong SAR, China.
Universiti Malaysia Sarawak · MYEducation University of Hong Kong · HKSarawak Biodiversity Centre · MYUniversity of Hong Kong · HK

Funding

Ministry of Higher Education, Malaysia under Fundamental Research Grant Scheme FRGS/1/2017/STG03/UNIMAS/02/4
6 · The paper itself

Abstract

Bacteria community provides essential ecological services to rice plants. The bacterial diversity of rice varies across host plant genotype and organs. This study employed 16S rDNA amplicon sequencing to characterise the bacterial community associated with three rice landraces using leaf blade and stem samples. The prokaryotic community found in these rice landraces comprised of two kingdoms, 12 phyla, 25 classes, 40 orders, 80 families, and 118 genera. Proteobacteria (53.9%) was the most abundant phylum. The most abundant genus was an undefined genus under Cyanobacteria (33.0%). Homogeneity of prokaryotic community was observed across the three rice landraces, which may suggest a high similarity in biological and genetical properties of the rice landraces. The difference in prokaryotic composition between leaf blade and stem was depicted based on principal coordinate analysis. This study observed that the prokaryotic inhabitants in rice plants is predominantly determined by rice plant organs.

Indexed as

CyanobacteriaOryzaDNA, RibosomalGenotypeHumansPlant LeavesRNA, Ribosomal, 16SDNA, RibosomalRNA, Ribosomal, 16S16S rDNABacteriaRiceSarawak

Identifiers

PMID36056990
OpenAlexW4294439709

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.