Evidence map›Paper›PMID 36056879›Full record

ArticleThe journal of physical chemistry. B2022

Interdomain Interactions Modulate the Active Site Dynamics of Human Inducible Nitric Oxide Synthase.

Goran W Tumbic, Jinghui Li, Ting Jiang, Md Yeathad Hossan, Changjian Feng, Megan C Thielges

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Goran W TumbicDepartment of Chemistry, Indiana University, Bloomington, Indiana 47405, United States.
Jinghui LiDepartment of Pharmaceutical Sciences, University of New Mexico, Albuquerque, New Mexico 87131, United States.
Ting JiangDepartment of Pharmaceutical Sciences, University of New Mexico, Albuquerque, New Mexico 87131, United States.
Md Yeathad HossanDepartment of Chemistry, Indiana University, Bloomington, Indiana 47405, United States.
Changjian FengDepartment of Pharmaceutical Sciences, University of New Mexico, Albuquerque, New Mexico 87131, United States.ORCID 0000-0003-4542-6497
Megan C ThielgesDepartment of Chemistry, Indiana University, Bloomington, Indiana 47405, United States.ORCID 0000-0002-4520-6673
Indiana University Bloomington · USUniversity of New Mexico · US

Funding

University of New Mexico Center for Metals in Biology and Medicine - equipment supplementP20GM130422 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Matthew J Campen · 2020 to 2026
$20.4M
Defining the conformational control of nitric oxide synthases by a multipronged approachR01GM133973 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI FENG, CHANGJIAN · 2020 to 2023
$1.5M
Conformations and Dynamics of Cytochrome P450s via 2D Infrared SpectroscopyR01GM114500 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI THIELGES, MEGAN CORRINE · 2017 to 2022
$1.1M
NIGMS NIH HHS P20 GM130422NIGMS NIH HHS R01 GM114500NIGMS NIH HHS R01 GM133973
6 · The paper itself

Abstract

Nitric oxide synthase (NOS) is a homodimeric flavohemoprotein responsible for catalyzing the oxidation of l-arginine (l-Arg) to citrulline and nitric oxide. Electrons are supplied for the reaction via interdomain electron transfer between an N-terminal heme-containing oxygenase domain and a FMN-containing (sub)domain of a C-terminal reductase domain. Extensive attention has focused on elucidating how conformational dynamics regulate electron transfer between the domains. Here we investigate the impact of the interdomain FMN-heme interaction on the heme active site dynamics of inducible NOS (iNOS). Steady state linear and time-resolved two-dimensional infrared (2D IR) spectroscopy was applied to probe a CO ligand at the heme within the oxygenase domain for full-length and truncated or mutated constructs of human iNOS. Whereas the linear IR spectra of the CO ligand were identical among the constructs, 2D IR spectroscopy revealed variation in the frequency dynamics. The wild-type constructs that can properly form the FMN/oxygenase docked state due to the presence of both the FMN and oxygenase domains showed slower dynamics than the oxygenase domain alone. Introduction of the mutation (E546N) predicted to perturb electrostatic interactions between the domains resulted in measured dynamics intermediate between those for the full-length and individual oxygenase domain, consistent with perturbation to the docked/undocked equilibrium. These results indicate that docking of the FMN domain to the oxygenase domain not only brings the FMN cofactor within electron transfer distance of the heme domain but also modulates the dynamics sensed by the CO ligand within the active site in a way expected to promote efficient electron transfer.

Indexed as

Flavin MononucleotideHemeCatalytic DomainElectron TransportHeme Oxygenase (Decyclizing)HumansLigandsNitric OxideNitric Oxide Synthase Type IIFlavin MononucleotideHemeHeme Oxygenase (Decyclizing)LigandsNitric OxideNitric Oxide Synthase Type II

Identifiers

PMID36056879
PMCPMC10110350
OpenAlexW4294408522

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.