Evidence map›Paper›PMID 36056023›Full record

ArticleNature communications2022

Isoform-specific and ubiquitination dependent recruitment of Tet1 to replicating heterochromatin modulates methylcytosine oxidation.

María Arroyo, Florian D Hastert, Andreas Zhadan, Florian Schelter, Susanne Zimbelmann, Cathia Rausch, Anne K Ludwig, Thomas Carell, M Cristina Cardoso

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
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  3. The mClinical epigenetics · 2026
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  7. Review
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  11. Epigenetic control of skeletal muscle atrophy.Cellular & molecular biology letters · 2024
    Review
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  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

María ArroyoCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Florian D HastertCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany. florian.hastert@pei.de.ORCID http://orcid.org/0000-0001-9961-5766
Andreas ZhadanCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Florian SchelterDepartment of Chemistry, Ludwig Maximilians University, Butenandstr. 5-13, 81377, Munich, Germany.
Susanne ZimbelmannCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Cathia RauschCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Anne K LudwigCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany.
Thomas CarellDepartment of Chemistry, Ludwig Maximilians University, Butenandstr. 5-13, 81377, Munich, Germany.ORCID http://orcid.org/0000-0001-7898-2831
M Cristina CardosoCell Biology and Epigenetics, Department of Biology, Technical University of Darmstadt, Schnittspahnstr. 10, 64287, Darmstadt, Germany. cardoso@bio.tu-darmstadt.de.ORCID http://orcid.org/0000-0001-8427-8859
Technische Universität Darmstadt · DELudwig-Maximilians-Universität München · DEHeidelberg University · DEUniversity of Luxembourg · LU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidation of the epigenetic DNA mark 5-methylcytosine by Tet dioxygenases is an established route to diversify the epigenetic information, modulate gene expression and overall cellular (patho-)physiology. Here, we demonstrate that Tet1 and its short isoform Tet1s exhibit distinct nuclear localization during DNA replication resulting in aberrant cytosine modification levels in human and mouse cells. We show that Tet1 is tethered away from heterochromatin via its zinc finger domain, which is missing in Tet1s allowing its targeting to these regions. We find that Tet1s interacts with and is ubiquitinated by CRL4(VprBP). The ubiquitinated Tet1s is then recognized by Uhrf1 and recruited to late replicating heterochromatin. This leads to spreading of 5-methylcytosine oxidation to heterochromatin regions, LINE 1 activation and chromatin decondensation. In summary, we elucidate a dual regulation mechanism of Tet1, contributing to the understanding of how epigenetic information can be diversified by spatio-temporal directed Tet1 catalytic activity.

Indexed as

5-MethylcytosineDioxygenasesAnimalsCCAAT-Enhancer-Binding ProteinsCytosineDNA-Binding ProteinsDNA MethylationHeterochromatinHumansMiceMixed Function OxygenasesProtein IsoformsProtein Serine-Threonine KinasesProto-Oncogene ProteinsUbiquitinationUbiquitin-Protein Ligases5-MethylcytosineCCAAT-Enhancer-Binding ProteinsCytosineDioxygenasesDNA-Binding ProteinsHeterochromatinMixed Function OxygenasesProtein IsoformsProtein Serine-Threonine KinasesProto-Oncogene ProteinsTET1 protein, humanTET1 protein, mouseUbiquitin-Protein LigasesUHRF1 protein, humanVprBP protein, mouse

Identifiers

PMID36056023
PMCPMC9440122
OpenAlexW4294275564

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.