Evidence map›Paper›PMID 36053463›Full record

ArticleMolecular diagnosis & therapy2022

Glioma 2021 WHO Classification: The Superiority of NGS Over IHC in Routine Diagnostics.

Paulina Śledzińska, Marek Bebyn, Ewelina Szczerba, Jacek Furtak, Maciej Harat, Natalia Olszewska, Katarzyna Kamińska, Janusz Kowalewski, Marzena A Lewandowska

Abstract read
In one paragraph

Article in Molecular diagnosis & therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  3. Evaluation of the Idylla IDH1-2 Mutation Assay for the Detection ofInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Paulina ŚledzińskaMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0002-8151-8332
Marek BebynMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0002-8650-6402
Ewelina SzczerbaMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0002-2738-3094
Jacek FurtakDepartment of Neurosurgery, 10th Military Research Hospital and Polyclinic, 85-681, Bydgoszcz, Poland.ORCID 0000-0001-9599-4156
Maciej HaratDepartment of Neurooncology and Radiosurgery, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0003-1785-3184
Natalia OlszewskaMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0003-0079-8342
Katarzyna KamińskaMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland.ORCID 0000-0002-9782-2283
Janusz KowalewskiDepartment of Thoracic Surgery and Tumors, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University, 85-067, Torun, Poland.ORCID 0000-0003-0450-1788
Marzena A LewandowskaMolecular Oncology and Genetics Department, Innovative Medical Forum, The F. Lukaszczyk Oncology Center, 85-796, Bydgoszcz, Poland. lewandowskam@co.bydgoszcz.pl.ORCID 0000-0002-7360-7810

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe accurate detection of genetic variants such as single substitutions (IDH1/2, TERT), chromosomal abnormalities (CDKN2A, 1p/19q deletions, and EGFR amplifications), or promoter methylations (MGMT) is critical for glioma patient management, as emphasized in the World Health Organization's (WHO's) most recent classification in 2021 (WHO CNS5). The purpose of this study was to evaluate novel innovative methods for determining IDH1/2 status in the context of WHO CNS5.

methodsMultiple biomarkers were simultaneously screened using next-generation sequencing (NGS) on 34 glioma samples. In cases where the IDH1/2 status determined by immunohistochemistry (IHC) or multiplex ligation-dependent probe amplification (MLPA) was inconsistent with the NGS results, quantitative polymerase chain reaction (qPCR) and Sanger sequencing were performed to resolve the adjudicated discrepancy.

resultsIDH1/2 NGS results differ from IHC (7/13 samples) as well as MLPA reports (1/4 samples). All NGS findings were confirmed by qPCR and Sanger sequencing. WHO CNS5 requires assessment of multiple mutations for glioma classification.

conclusionsWe demonstrated that qPCR or NGS performed in reference genetic laboratories, rather than IHC, is the most reliable method for IDH1/2 analysis. Clinicians should be aware of discrepancies in MLPA or IHC results and seek reconsultation in facilities with extensive access to advanced molecular technologies. Moreover, we proposed a new algorithm for the molecular diagnostic procedures in glioma patients based on the WHO CNS5.

Indexed as

Brain NeoplasmsGliomaHigh-Throughput Nucleotide SequencingHumansImmunohistochemistryIsocitrate DehydrogenaseMutationWorld Health OrganizationIsocitrate Dehydrogenase

Identifiers

PMID36053463
PMCPMC9626418

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.