Evidence map›Paper›PMID 36053214›Full record

ArticleThe Journal of cell biology2022

Origin of cytoplasmic GDP-fucose determines its contribution to glycosylation reactions.

Paulina Sosicka, Bobby G Ng, Lauren E Pepi, Asif Shajahan, Maurice Wong, David A Scott, Kenjiroo Matsumoto, Zhi-Jie Xia, Carlito B Lebrilla, Robert S Haltiwanger and 2 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  10. ProteinMolecules (Basel, Switzerland) · 2025
    Review
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  14. Review
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  16. Article
  17. Toward Automatic Inference of Glycan Linkages Using MSJournal of the American Society for Mass Spectrometry · 2023
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Paulina SosickaHuman Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA.ORCID 0000-0002-6693-9542
Bobby G NgHuman Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA.
Lauren E PepiComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia.ORCID 0000-0002-5740-4175
Asif ShajahanComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia.ORCID 0000-0002-4804-1130
Maurice WongDepartment of Chemistry, University of California Davis, Davis, CA.
David A ScottCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA.ORCID 0000-0002-8668-2449
Kenjiroo MatsumotoComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia.ORCID 0000-0002-9903-1506
Zhi-Jie XiaHuman Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA.
Carlito B LebrillaDepartment of Chemistry, University of California Davis, Davis, CA.
Robert S HaltiwangerComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia.
Parastoo AzadiComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia.
Hudson H FreezeHuman Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA.
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of Georgia · USUniversity of California, Davis · US

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ELENA B PASQUALE · 1985 to 2026
$107.2M
O-Glycosylation of Epidermal Growth Factor-like MotifsR01GM061126 · NIGMS · UNIVERSITY OF GEORGIA · PI HALTIWANGER, ROBERT S. · 2001 to 2021
$9.1M
Pilot and Feasibility CoreU54NS115198 · NINDS · MAYO CLINIC ROCHESTER · PI LAM, CHRISTINA · 2019 to 2023
$8.2M
New Congenital Disorders of Glycosylation: Therapy and ModelsR01DK099551 · NIDDK · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Hudson H. Freeze · 2014 to 2026
$6.7M
The incorporation of human milk oligosaccharides in brain glycoconjugatesR01GM049077 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEBRILLA, CARLITO B · 1999 to 2024
$6.3M
National Glycoscience Resource- CCRC Service and Training - NGlycoR@CCRCR24GM137782 · NIGMS · UNIVERSITY OF GEORGIA · PI Parastoo Azadi · 2020 to 2026
$5.2M
Frontiers in Fundamental and Translational ImmunologyT32AI125209 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI BRADLEY, LINDA MAC PHERSON · 2018 to 2022
$957k
Orbitrap Fusion Tribrid Mass SpectrometerS10OD018530 · OD · UNIVERSITY OF GEORGIA · PI AZADI, PARASTOO · 2014 to 2014
$750k
NCI NIH HHS P30 CA030199NIAID NIH HHS T32 AI125209NIDDK NIH HHS R01 DK099551NIGMS NIH HHS R01 GM049077NIGMS NIH HHS R01 GM061126NIGMS NIH HHS R24 GM137782NIH HHS S10 OD018530NINDS NIH HHS U54 NS115198
6 · The paper itself

Abstract

Biosynthesis of macromolecules requires precursors such as sugars or amino acids, originating from exogenous/dietary sources, reutilization/salvage of degraded molecules, or de novo synthesis. Since these sources are assumed to contribute to one homogenous pool, their individual contributions are often overlooked. Protein glycosylation uses monosaccharides from all the above sources to produce nucleotide sugars required to assemble hundreds of distinct glycans. Here, we demonstrate that cells identify the origin/heritage of the monosaccharide, fucose, for glycosylation. We measured the contribution of GDP-fucose from each of these sources for glycan synthesis and found that different fucosyltransferases, individual glycoproteins, and linkage-specific fucose residues identify and select different GDP-fucose pools dependent on their heritage. This supports the hypothesis that GDP-fucose exists in multiple, distinct pools, not as a single homogenous pool. The selection is tightly regulated since the overall pool size remains constant. We present novel perspectives on monosaccharide metabolism, which may have a general applicability.

Indexed as

FucoseGlycosylationGuanosine Diphosphate FucosePolysaccharidesFucoseGuanosine Diphosphate FucosePolysaccharides

Identifiers

PMID36053214
PMCPMC9441714
OpenAlexW4294281309

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.