Evidence map›Paper›PMID 36053171›Full record

ArticleEpilepsia open2022

An approach for reliably identifying high-frequency oscillations and reducing false-positive detections.

Yufeng Zhou, Jing You, Udaya Kumar, Shennan A Weiss, Anatol Bragin, Jerome Engel, Christos Papadelis, Lin Li

Open access · goldAbstract read
In one paragraph

Article in Epilepsia open, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Networks through the lens of high-frequency oscillations.Frontiers in network physiology · 2024
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Yufeng ZhouDepartment of Biomedical Engineering, University of North Texas, Texas, USA.
Jing YouDepartment of Biomedical Engineering, University of North Texas, Texas, USA.
Udaya KumarDepartment of Neurology, University of California Los Angeles, Los Angeles, California, USA.ORCID 0000-0003-0725-0195
Shennan A WeissDepartments of Neurology, Department of Physiology and Pharmacology, State University of New York Downstate, Brooklyn, New York, USA.ORCID 0000-0003-0825-8439
Anatol BraginDepartment of Neurology, University of California Los Angeles, Los Angeles, California, USA.ORCID 0000-0003-1207-8481
Jerome EngelDepartment of Neurology, University of California Los Angeles, Los Angeles, California, USA.
Christos PapadelisJane and John Justin Neurosciences Center, Cook Children's Health Care System, Fort Worth, Texas, USA.
Lin LiDepartment of Biomedical Engineering, University of North Texas, Texas, USA.ORCID 0000-0002-9996-9377
University of California, Los Angeles · USUniversity of North Texas · USBoston Children's Hospital · USNew York City Health and Hospitals Corporation · US

Funding

The Epilepsy Bioinformatics Study for Antiepileptogenic Therapy (EpiBioS4Rx) Public Engagement CoreU54NS100064 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MOSHE, SOLOMON L. · 2017 to 2021
$21.7M
IN VIVO STUDIES OF THE EPILEPTIC HIPPOCAMPUSR01NS033310 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JEROME NONE ENGEL, Richard Staba · 1994 to 2026
$7.5M
New Electrographic Biomarkers of EpileptogenesisR01NS065877 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BRAGIN, ANATOL · 2010 to 2018
$4.0M
IN VIVO STUDIES OF THE EPILEPTIC HIPPOCAMPUSR37NS033310 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ENGEL, JEROME NONE · 2004 to 2010
$3.2M
Interictal High Frequency Oscillations of Epileptogenecity in Pediatric PatientsR01NS104116 · NINDS · COOK CHILDREN'S MEDICAL CENTER · PI PAPADELIS, CHRISTOS · 2019 to 2024
$2.4M
New approach for identification pHFO networks to predict epileptogenesisR16NS131108 · NINDS · UNIVERSITY OF NORTH TEXAS · PI Lin Li · 2022 to 2026
$1.3M
New Biomarkers of EpileptogenesisR56NS065877 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BRAGIN, ANATOL · 2019 to 2019
$540k
NINDS NIH HHS R01 NS033310NINDS NIH HHS R01 NS065877NINDS NIH HHS R01 NS104116NINDS NIH HHS R16 NS131108NINDS NIH HHS R37 NS033310NINDS NIH HHS R56 NS065877NINDS NIH HHS U54 NS100064
6 · The paper itself

Abstract

objectiveAiming to improve the feasibility and reliability of using high-frequency oscillations (HFOs) for translational studies of epilepsy, we present a pipeline with features specifically designed to reject false positives for HFOs to improve the automatic HFO detector.

methodsWe presented an integrated, multi-layered procedure capable of automatically rejecting HFOs from a variety of common false positives, such as motion, background signals, and sharp transients. This method utilizes a time-frequency contour approach that embeds three different layers including peak constraints, power thresholds, and morphological identification to discard false positives. Four experts were involved in rating detected HFO events that were randomly selected from different posttraumatic epilepsy (PTE) animals for a comprehensive evaluation.

resultsThe algorithm was run on 768-h recordings of intracranial electrodes in 48 PTE animals. A total of 453 917 HFOs were identified by initial HFO detection, of which 450 917 were implemented for HFO refinement and 203 531 events were retained. Random sampling was used to evaluate the performance of the detector. The HFO detection yielded an overall accuracy of SIGNIFICANCE: Our approach shows that a segregated pipeline design with a focus on false-positive rejection can improve the detection efficiency and provide reliable results. This pipeline does not require customization and uses fixed parameters, making it highly feasible and translatable for basic and clinical applications of epilepsy.

Indexed as

EpilepsyEpilepsy, Post-TraumaticAlgorithmsAnimalsElectroencephalographyReproducibility of Resultscomplex waveletepilepsyhigh-frequency oscillationstopographical analysis

Identifiers

PMID36053171
PMCPMC9712470
OpenAlexW4294281185

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.