Evidence map›Paper›PMID 36052370›Full record

ArticlebioRxiv : the preprint server for biology2022

1,000 ancient genomes uncover 10,000 years of natural selection in Europe.

Megan K Le, Olivia S Smith, Ali Akbari, Arbel Harpak, David Reich, Vagheesh M Narasimhan

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 75 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Megan K LeDepartment of Computer Science, The University of Texas at Austin.
Olivia S SmithDepartment of Integrative Biology, The University of Texas at Austin.
Ali AkbariDepartment of Genetics, Harvard Medical School.
Arbel HarpakDepartment of Integrative Biology, The University of Texas at Austin.
David ReichDepartment of Genetics, Harvard Medical School.
Vagheesh M NarasimhanDepartment of Integrative Biology, The University of Texas at Austin.
The University of Texas at Austin · USBroad Institute · US

Funding

Solving ascertainment bias in ancient DNA using Ultima Genomics sequencingR01HG012287 · NHGRI · HARVARD MEDICAL SCHOOL · PI REICH, DAVID E · 2021 to 2025
$2.7M
Population mixture in evolutionary and medical geneticsR01GM100233 · NIGMS · HARVARD MEDICAL SCHOOL · PI PATTERSON, NICK J, REICH, DAVID E · 2012 to 2019
$2.7M
Making Genomic Prediction of Complex Disease EquitableR35GM151108 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Arbel Harpak · 2023 to 2026
$1.6M
NHGRI NIH HHS R01 HG012287NIGMS NIH HHS R01 GM100233NIGMS NIH HHS R35 GM151108
6 · The paper itself

Abstract

Ancient DNA has revolutionized our understanding of human population history. However, its potential to examine how rapid cultural evolution to new lifestyles may have driven biological adaptation has not been met, largely due to limited sample sizes. We assembled genome-wide data from 1,291 individuals from Europe over 10,000 years, providing a dataset that is large enough to resolve the timing of selection into the Neolithic, Bronze Age, and Historical periods. We identified 25 genetic loci with rapid changes in frequency during these periods, a majority of which were previously undetected. Signals specific to the Neolithic transition are associated with body weight, diet, and lipid metabolism-related phenotypes. They also include immune phenotypes, most notably a locus that confers immunity to

Identifiers

PMID36052370
PMCPMC9435429
OpenAlexW4293150334

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.