Evidence map›Paper›PMID 36051101›Full record

ArticleWorld journal of gastrointestinal oncology2022

Differences of core genes in liver fibrosis and hepatocellular carcinoma: Evidence from integrated bioinformatics and immunohistochemical analysis.

Yue Li, Shou-Li Yuan, Jing-Ya Yin, Kun Yang, Xin-Gang Zhou, Wen Xie, Qi Wang

Open access · diamondAbstract read
In one paragraph

Article in World journal of gastrointestinal oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yue LiDepartment of Pathology, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China.
Shou-Li YuanKey Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing 100101, China.
Jing-Ya YinCenter of Liver Diseases, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China.
Kun YangDepartment of Pathology, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China.
Xin-Gang ZhouDepartment of Pathology, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China.
Wen XieCenter of Liver Diseases, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China.
Qi WangCenter of Liver Diseases, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China. wangqidl04@ccmu.edu.cn.
Capital Medical University · CNBeijing Ditan Hospital · CNInstitute of Zoology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLiver fibrosis and hepatocellular carcinoma (HCC) are common adverse consequences of chronic liver injury. The interaction of various risk factors may cause them to happen. Identification of specific biomarkers is of great significance for understanding the occurrence, development mechanisms, and determining the novel tools for diagnosis and treatment of both liver fibrosis and HCC.

aimTo identify liver fibrosis-related core genes, we analyzed the differential expression pattern of core genes in liver fibrosis and HCC.

methodsGene expression profiles of three datasets, GSE14323, GSE36411, and GSE89377, obtained from the Gene Expression Omnibus (GEO) database, were analyzed, and differentially expressed genes (DEGs) between patients with liver cirrhosis and healthy controls were identified by screening

resultsForty-five DEGs (43 upregulated and 2 downregulated genes) associated with liver cirrhosis were identified from three GEO datasets. Ten hub genes were identified, which were upregulated in liver cirrhosis. Western blot and immunohistochemical analyses of the three core genes, decorin (

conclusionThe expression levels of

Indexed as

Bioinformatical analysisDecorinDermatopontinHepatocellular carcinomaLiver cirrhosisSRY-box transcription factor 9

Identifiers

PMID36051101
PMCPMC9305567
OpenAlexW4284885437

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.